Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC096638.1-201ENST00000444678 216 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF144AP50876 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF144AP50876 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF144AP50876 RN7SL174P-201ENST00000475578 289 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 AC010409.1-201ENST00000487382 476 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 COX6B1P2-201ENST00000489624 230 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 HMGB3P3-201ENST00000510526 400 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 AC010265.1-201ENST00000513509 211 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF144AP50876 RNU4ATAC15P-201ENST00000516415 126 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF144AP50876 AC027369.5-201ENST00000533838 755 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 MIR3684-201ENST00000579779 74 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 SNORD84-203ENST00000584275 78 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF144AP50876 MIR4302-201ENST00000638058 60 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF144AP50876 AC090971.4-201ENST00000560291 1800 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF144AP50876 AL109809.4-201ENST00000603520 2185 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
RNF144AP50876 AC116096.1-201ENST00000566804 2314 ntBASIC4.94□□□□□ -1.62
RNF144AP50876 AC023421.1-201ENST00000590535 1785 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RNF144AP50876 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF144AP50876 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RNF144AP50876 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF144AP50876 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF144AP50876 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
RNF144AP50876 RNA5SP335-201ENST00000363817 110 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 RNU6-961P-201ENST00000363893 105 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 Y_RNA.217-201ENST00000364214 105 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF144AP50876 SNORA40.19-201ENST00000390846 128 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 RNA5SP487-201ENST00000410186 122 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 WARS2P1-201ENST00000429678 537 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.93□□□□□ -1.62
RNF144AP50876 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF144AP50876 Y_RNA.641-201ENST00000459414 105 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 AC114982.1-201ENST00000469402 321 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 NIP7P2-201ENST00000485801 544 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF144AP50876 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 AC108043.1-201ENST00000512696 574 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 SNORA40.9-201ENST00000515895 93 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF144AP50876 AC040958.1-201ENST00000561102 201 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.93□□□□□ -1.62
RNF144AP50876 BPIFA4P-203ENST00000603168 689 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 AL133393.1-201ENST00000603277 287 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 AC109309.2-201ENST00000612597 332 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 AC131238.1-201ENST00000617135 328 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
RNF144AP50876 MIR8080-201ENST00000622224 89 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF144AP50876 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF144AP50876 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RNF144AP50876 ADAM5-202ENST00000399789 1942 ntBASIC4.93□□□□□ -1.62
RNF144AP50876 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF144AP50876 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.93□□□□□ -1.62
RNF144AP50876 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF144AP50876 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF144AP50876 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
RNF144AP50876 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNF144AP50876 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF144AP50876 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF144AP50876 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNF144AP50876 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF144AP50876 MIR323A-201ENST00000362199 86 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 RNU6-78P-201ENST00000362897 107 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 RNU6-653P-201ENST00000363074 106 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 RNU6-151P-201ENST00000364158 107 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
RNF144AP50876 RNU6-1286P-201ENST00000383871 107 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 RNU6-166P-201ENST00000384371 107 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 MIR105-1-201ENST00000385222 81 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 CYCSP32-201ENST00000440548 321 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 EIF4A1P11-201ENST00000451239 222 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF144AP50876 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.92□□□□□ -1.62
RNF144AP50876 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF144AP50876 RPL10P14-201ENST00000565265 298 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 MIR5695-201ENST00000579717 85 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 AC233702.9-201ENST00000581528 203 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.92□□□□□ -1.62
RNF144AP50876 AC011445.2-201ENST00000599274 173 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 AL589674.2-201ENST00000604304 337 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 AC023043.4-201ENST00000612081 449 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 AC109583.2-201ENST00000617367 129 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 Y_RNA.778-201ENST00000620203 90 ntBASIC4.92□□□□□ -1.62
RNF144AP50876 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.92□□□□□ -1.62
RNF144AP50876 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RNF144AP50876 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RNF144AP50876 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
RNF144AP50876 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
RNF144AP50876 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.92□□□□□ -1.62
RNF144AP50876 AC008079.2-201ENST00000623543 20396 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms