Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 CBX3P1-201ENST00000325243 554 ntBASIC0.59□□□□□ -2.32
HTTP42858 AC009302.1-201ENST00000417147 390 ntBASIC0.59□□□□□ -2.32
HTTP42858 HMGB1P46-201ENST00000520062 610 ntBASIC0.59□□□□□ -2.32
HTTP42858 CYP4A27P-201ENST00000567218 190 ntBASIC0.59□□□□□ -2.32
HTTP42858 AP000654.2-201ENST00000605633 586 ntBASIC0.59□□□□□ -2.32
HTTP42858 AC009902.3-201ENST00000606235 2172 ntBASIC0.59□□□□□ -2.32
HTTP42858 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
HTTP42858 RNU6-185P-201ENST00000384421 107 ntBASIC0.58□□□□□ -2.32
HTTP42858 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.58□□□□□ -2.32
HTTP42858 UBBP3-201ENST00000445497 241 ntBASIC0.58□□□□□ -2.32
HTTP42858 SNORD59.2-201ENST00000516873 68 ntBASIC0.58□□□□□ -2.32
HTTP42858 AC021646.1-201ENST00000605469 484 ntBASIC0.58□□□□□ -2.32
HTTP42858 CISD1P1-201ENST00000393907 327 ntBASIC0.58□□□□□ -2.32
HTTP42858 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC0.58□□□□□ -2.32
HTTP42858 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC0.58□□□□□ -2.32
HTTP42858 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.58□□□□□ -2.32
HTTP42858 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.58□□□□□ -2.32
HTTP42858 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC0.58□□□□□ -2.32
HTTP42858 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.58□□□□□ -2.32
HTTP42858 AC009974.1-201ENST00000608881 455 ntBASIC0.58□□□□□ -2.32
HTTP42858 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
HTTP42858 SNRPEP4-201ENST00000435815 279 ntBASIC0.58□□□□□ -2.32
HTTP42858 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.58□□□□□ -2.32
HTTP42858 RNU1-98P-201ENST00000458992 160 ntBASIC0.58□□□□□ -2.32
HTTP42858 HMGN2P13-201ENST00000476476 274 ntBASIC0.58□□□□□ -2.32
HTTP42858 SSR3-208ENST00000496050 579 ntTSL 4 BASIC0.58□□□□□ -2.32
HTTP42858 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
HTTP42858 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.58□□□□□ -2.32
HTTP42858 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
HTTP42858 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.57□□□□□ -2.32
HTTP42858 SNORD95.1-201ENST00000364099 68 ntBASIC0.57□□□□□ -2.32
HTTP42858 AL031183.1-201ENST00000457667 207 ntBASIC0.57□□□□□ -2.32
HTTP42858 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC0.57□□□□□ -2.32
HTTP42858 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.57□□□□□ -2.32
HTTP42858 AC123786.2-201ENST00000603459 275 ntBASIC0.57□□□□□ -2.32
HTTP42858 AC109809.1-201ENST00000619665 545 ntBASIC0.57□□□□□ -2.32
HTTP42858 AC008555.8-201ENST00000623602 2168 ntBASIC0.57□□□□□ -2.32
HTTP42858 RNU4-67P-201ENST00000364569 141 ntBASIC0.57□□□□□ -2.32
HTTP42858 AC073614.1-201ENST00000438690 650 ntBASIC0.57□□□□□ -2.32
HTTP42858 RPS26P56-201ENST00000444468 240 ntBASIC0.57□□□□□ -2.32
HTTP42858 AL035666.1-201ENST00000446195 348 ntBASIC0.57□□□□□ -2.32
HTTP42858 RPS27P23-201ENST00000487608 251 ntBASIC0.57□□□□□ -2.32
HTTP42858 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.57□□□□□ -2.32
HTTP42858 AF279873.1-201ENST00000523393 313 ntBASIC0.57□□□□□ -2.32
HTTP42858 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
HTTP42858 OR5H6-203ENST00000642105 978 ntBASIC0.57□□□□□ -2.32
HTTP42858 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
HTTP42858 RNU6-48P-201ENST00000384161 107 ntBASIC0.56□□□□□ -2.32
HTTP42858 SNORD23.1-201ENST00000408212 104 ntBASIC0.56□□□□□ -2.32
HTTP42858 AL606489.2-201ENST00000433886 234 ntBASIC0.56□□□□□ -2.32
HTTP42858 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.56□□□□□ -2.32
HTTP42858 AC005410.1-202ENST00000460347 485 ntBASIC0.56□□□□□ -2.32
HTTP42858 MTND4LP3-201ENST00000468320 276 ntBASIC0.56□□□□□ -2.32
HTTP42858 AL355802.3-201ENST00000607571 545 ntBASIC0.56□□□□□ -2.32
HTTP42858 AC007275.1-201ENST00000621243 671 ntBASIC0.56□□□□□ -2.32
HTTP42858 RNA5SP189-201ENST00000364920 115 ntBASIC0.56□□□□□ -2.32
HTTP42858 RPL31P52-201ENST00000407532 367 ntBASIC0.56□□□□□ -2.32
HTTP42858 AC096533.1-201ENST00000411645 353 ntBASIC0.56□□□□□ -2.32
HTTP42858 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.56□□□□□ -2.32
HTTP42858 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.56□□□□□ -2.32
HTTP42858 Y_RNA.700-201ENST00000516806 100 ntBASIC0.56□□□□□ -2.32
HTTP42858 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
HTTP42858 AC084033.1-201ENST00000550830 633 ntBASIC0.56□□□□□ -2.32
HTTP42858 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
HTTP42858 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.56□□□□□ -2.32
HTTP42858 AC135178.6-201ENST00000605314 398 ntBASIC0.56□□□□□ -2.32
HTTP42858 AC009090.3-201ENST00000616553 565 ntBASIC0.56□□□□□ -2.32
HTTP42858 RNA5SP368-201ENST00000364298 116 ntBASIC0.55□□□□□ -2.32
HTTP42858 RNU4-42P-201ENST00000364738 142 ntBASIC0.55□□□□□ -2.32
HTTP42858 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.55□□□□□ -2.32
HTTP42858 MTATP6P4-201ENST00000427725 675 ntBASIC0.55□□□□□ -2.32
HTTP42858 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
HTTP42858 AC118282.2-201ENST00000508739 374 ntBASIC0.55□□□□□ -2.32
HTTP42858 OR5BM1P-201ENST00000512021 366 ntBASIC0.55□□□□□ -2.32
HTTP42858 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.55□□□□□ -2.32
HTTP42858 LINC00557-201ENST00000563184 1279 ntBASIC0.55□□□□□ -2.32
HTTP42858 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC0.55□□□□□ -2.32
HTTP42858 AC068620.3-201ENST00000602749 560 ntBASIC0.55□□□□□ -2.32
HTTP42858 MIR518A2-201ENST00000384966 87 ntBASIC0.55□□□□□ -2.32
HTTP42858 SFR1P1-201ENST00000403720 688 ntBASIC0.55□□□□□ -2.32
HTTP42858 AC093716.1-201ENST00000435923 377 ntBASIC0.55□□□□□ -2.32
HTTP42858 AC118469.1-201ENST00000442943 488 ntBASIC0.55□□□□□ -2.32
HTTP42858 RPL31P60-201ENST00000478450 367 ntBASIC0.55□□□□□ -2.32
HTTP42858 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.55□□□□□ -2.32
HTTP42858 AC090953.1-201ENST00000604305 1092 ntBASIC0.55□□□□□ -2.32
HTTP42858 AC006213.5-201ENST00000619673 288 ntBASIC0.55□□□□□ -2.32
HTTP42858 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.55□□□□□ -2.32
HTTP42858 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC0.55□□□□□ -2.32
HTTP42858 HMGB3P17-201ENST00000504195 649 ntBASIC0.55□□□□□ -2.32
HTTP42858 SMARCE1P4-201ENST00000523647 241 ntBASIC0.55□□□□□ -2.32
HTTP42858 uc_338.14-201ENST00000613162 166 ntBASIC0.55□□□□□ -2.32
HTTP42858 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.54□□□□□ -2.32
HTTP42858 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC0.54□□□□□ -2.32
HTTP42858 RNU6-711P-201ENST00000517255 106 ntBASIC0.54□□□□□ -2.32
HTTP42858 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC0.54□□□□□ -2.32
HTTP42858 AL022578.1-201ENST00000439330 1433 ntBASIC0.54□□□□□ -2.32
HTTP42858 RNU6-39P-201ENST00000384344 107 ntBASIC0.54□□□□□ -2.32
HTTP42858 MIR153-2-201ENST00000385225 87 ntBASIC0.54□□□□□ -2.32
HTTP42858 U8.14-201ENST00000390843 143 ntBASIC0.54□□□□□ -2.32
HTTP42858 AC244453.4-201ENST00000419150 388 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms