Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AL359385.1-201ENST00000456509 365 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 RN7SL297P-201ENST00000483161 293 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 VN1R104P-201ENST00000505115 1009 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCLP35914 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCLP35914 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCLP35914 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCLP35914 AC006445.2-201ENST00000510061 472 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 AC117532.1-201ENST00000514638 323 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 RNA5SP282-201ENST00000516355 108 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 SCARNA15.2-201ENST00000516409 127 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 NRON-201ENST00000517270 370 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCLP35914 DEFB108A-201ENST00000530110 222 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 AP002963.1-201ENST00000530590 184 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 AP000907.2-201ENST00000530827 353 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCLP35914 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCLP35914 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCLP35914 RPL21P5-201ENST00000554662 472 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCLP35914 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCLP35914 MIR548AB-201ENST00000584917 84 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 AC009977.1-201ENST00000586015 570 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 NBR2-204ENST00000587322 63 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 KC877982.1-201ENST00000602313 470 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 AC239868.4-201ENST00000608318 671 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 AC103710.2-201ENST00000609912 942 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 AP000254.1-201ENST00000609934 520 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.65□□□□□ -1.99
HMGCLP35914 AC048344.4-201ENST00000619744 527 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 AL161431.1-201ENST00000618966 4205 ntBASIC2.65□□□□□ -1.99
HMGCLP35914 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGCLP35914 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
HMGCLP35914 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
HMGCLP35914 RNU6-859P-201ENST00000362728 107 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 RNU1-100P-201ENST00000365255 165 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 SNORA75-201ENST00000384158 137 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 RNY3P10-201ENST00000384764 102 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 U3.26-201ENST00000391236 204 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 AL356057.3-201ENST00000402607 340 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 MIR1290-201ENST00000408735 78 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 HMGN1P14-201ENST00000412459 517 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 AC019097.1-201ENST00000424783 735 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 AC063976.3-201ENST00000426849 329 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 AC009961.2-201ENST00000435771 251 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.64□□□□□ -1.99
HMGCLP35914 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.64□□□□□ -1.99
HMGCLP35914 MRPL50P4-201ENST00000446432 475 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGCLP35914 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.64□□□□□ -1.99
HMGCLP35914 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.64□□□□□ -1.99
HMGCLP35914 SNORD109B-201ENST00000458961 67 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 SNORD109A-201ENST00000459128 67 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGCLP35914 RAP1BP2-201ENST00000478270 544 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 LARP1BP2-201ENST00000486594 519 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 RPS15AP36-201ENST00000492022 382 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HMGCLP35914 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
HMGCLP35914 RNA5SP356-201ENST00000515972 94 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 RPPH1-2P-201ENST00000516688 293 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 HMGN1P28-201ENST00000521340 364 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 AC004486.1-201ENST00000546846 233 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.64□□□□□ -1.99
HMGCLP35914 HMGN1P30-201ENST00000589286 268 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.64□□□□□ -1.99
HMGCLP35914 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGCLP35914 AC010620.2-201ENST00000600135 313 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 AC073544.2-201ENST00000601155 540 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 AL358072.1-201ENST00000604156 575 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 AL137843.1-201ENST00000605078 385 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 RNU6-87P-201ENST00000607561 108 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGCLP35914 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.64□□□□□ -1.99
HMGCLP35914 AC108479.2-201ENST00000617314 601 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGCLP35914 AC112204.3-201ENST00000623822 332 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGCLP35914 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.64□□□□□ -1.99
HMGCLP35914 AC092104.1-201ENST00000497346 1441 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.64□□□□□ -1.99
HMGCLP35914 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.64□□□□□ -1.99
HMGCLP35914 RNU6-1284P-201ENST00000363701 100 ntBASIC2.63□□□□□ -1.99
HMGCLP35914 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.63□□□□□ -1.99
HMGCLP35914 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGCLP35914 Y_RNA.553-201ENST00000384670 102 ntBASIC2.63□□□□□ -1.99
HMGCLP35914 MIR514A1-201ENST00000385133 98 ntBASIC2.63□□□□□ -1.99
HMGCLP35914 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
HMGCLP35914 AL359634.1-202ENST00000404721 284 ntBASIC2.63□□□□□ -1.99
HMGCLP35914 AC018630.2-202ENST00000422992 927 ntBASIC2.63□□□□□ -1.99
HMGCLP35914 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGCLP35914 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.63□□□□□ -1.99
HMGCLP35914 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGCLP35914 AL022238.1-201ENST00000442557 355 ntBASIC2.63□□□□□ -1.99
HMGCLP35914 AC108059.3-201ENST00000456388 214 ntBASIC2.63□□□□□ -1.99
HMGCLP35914 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.63□□□□□ -1.99
HMGCLP35914 MTCO2P29-201ENST00000465212 189 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 180.1 ms