Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AC013553.2-201ENST00000604244 589 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 AL161729.4-201ENST00000604650 476 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXC13P31276 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 AC072046.2-201ENST00000618366 268 ntBASIC3.28□□□□□ -1.88
HOXC13P31276 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.28□□□□□ -1.88
HOXC13P31276 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
HOXC13P31276 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
HOXC13P31276 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
HOXC13P31276 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC13P31276 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC13P31276 Y_RNA.70-201ENST00000362886 110 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 RNU6-1180P-201ENST00000364935 107 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC13P31276 TXNP7-201ENST00000406296 293 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC13P31276 RSU1P2-202ENST00000437884 485 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC13P31276 EPS15P1-201ENST00000448836 336 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 RPS29P26-201ENST00000477483 171 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 RPS4XP22-201ENST00000480755 780 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 RPS27P26-201ENST00000494583 239 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXC13P31276 RNU6-1256P-201ENST00000516539 103 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 RNU6-928P-201ENST00000516876 104 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 RNA5SP380-201ENST00000517190 98 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 SUB1P1-201ENST00000524415 382 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 AP003392.2-201ENST00000527269 208 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 AP002748.2-201ENST00000528671 348 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 AC087276.1-201ENST00000529659 480 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC13P31276 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC13P31276 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC13P31276 AL121579.1-201ENST00000555129 305 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXC13P31276 ROCK1P1-201ENST00000573767 549 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.27□□□□□ -1.89
HOXC13P31276 RPL12P50-201ENST00000603116 116 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 TUG1_2.1-201ENST00000614234 87 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 AC091903.1-201ENST00000624322 454 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC13P31276 OR5AK4P-201ENST00000635912 903 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC13P31276 MIR7153-201ENST00000637758 57 ntBASIC3.27□□□□□ -1.89
HOXC13P31276 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.27□□□□□ -1.89
HOXC13P31276 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
HOXC13P31276 AC092447.7-201ENST00000422212 1621 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 PABPC1P9-201ENST00000426076 1612 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 MTND4P23-201ENST00000447723 1363 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 Y_RNA.813-201ENST00000364639 102 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC13P31276 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
HOXC13P31276 BTF3P7-201ENST00000407097 488 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC13P31276 UBE2FP1-201ENST00000416536 447 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXC13P31276 AL365496.1-201ENST00000426885 215 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC13P31276 RPL23AP22-201ENST00000437556 453 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 USP9YP29-201ENST00000445112 563 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AL606662.1-201ENST00000445763 553 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXC13P31276 TPT1P14-201ENST00000448018 505 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AL118496.2-201ENST00000448300 230 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AL162389.1-201ENST00000449233 177 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC13P31276 AC092001.1-201ENST00000453012 261 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AL590639.1-201ENST00000456484 337 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXC13P31276 OR6K1P-201ENST00000456766 971 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 TPT1P7-201ENST00000458300 517 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 RN7SL442P-201ENST00000473804 320 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AC126182.1-201ENST00000478134 357 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 RPS15AP36-201ENST00000492022 382 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 PRDX4P1-201ENST00000507189 574 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 HSPE1P23-201ENST00000509838 286 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 RNA5SP385-201ENST00000515947 110 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 RN7SKP132-201ENST00000516001 208 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AC025881.1-201ENST00000518851 512 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.26□□□□□ -1.89
HOXC13P31276 AC013828.2-201ENST00000532487 235 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXC13P31276 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC13P31276 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC13P31276 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC13P31276 ISCA1P3-201ENST00000577104 373 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC13P31276 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC13P31276 AC007038.2-201ENST00000608095 740 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AC103710.4-201ENST00000609301 899 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 AC092794.2-201ENST00000620933 563 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 MIR622-201ENST00000638396 96 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC13P31276 MTND5P33-201ENST00000571250 1450 ntBASIC3.26□□□□□ -1.89
HOXC13P31276 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC13P31276 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXC13P31276 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
HOXC13P31276 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC13P31276 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms