Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXC8P31273 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXC8P31273 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC8P31273 RNY4P24-201ENST00000362735 96 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 RN7SKP226-201ENST00000364912 300 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC8P31273 RNU5A-6P-201ENST00000384136 116 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 RNU6-278P-201ENST00000390945 109 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 Y_RNA.582-201ENST00000391023 95 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 SNORD115.1-201ENST00000391109 76 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AL109755.1-201ENST00000401791 649 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 C1DP2-201ENST00000418167 426 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AL512844.2-201ENST00000433990 593 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 TPT1P14-201ENST00000448018 505 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.26□□□□□ -1.89
HOXC8P31273 GAPDHP17-201ENST00000449858 1001 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC8P31273 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC8P31273 AC093899.1-201ENST00000457984 376 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC8P31273 AC114967.1-201ENST00000504890 259 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
HOXC8P31273 RNU6-430P-201ENST00000517078 107 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXC8P31273 AP003467.2-201ENST00000520175 319 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AP003181.2-201ENST00000528941 181 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AP000867.2-201ENST00000532468 320 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXC8P31273 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.26□□□□□ -1.89
HOXC8P31273 MTATP6P3-201ENST00000581686 676 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AC002545.1-201ENST00000592511 181 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.26□□□□□ -1.89
HOXC8P31273 AL359999.1-201ENST00000604513 294 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AL161729.4-201ENST00000604650 476 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 OR10AB1P-201ENST00000609613 938 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AC103710.1-201ENST00000610003 901 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AC109347.2-201ENST00000610220 349 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AL591516.1-201ENST00000611326 274 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AC092794.1-201ENST00000612734 582 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 SDR42E1P2-201ENST00000614861 481 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AC010133.1-201ENST00000615809 842 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AC090132.2-201ENST00000615881 347 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 AC112204.3-201ENST00000623822 332 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 OR5H6-203ENST00000642105 978 ntBASIC3.26□□□□□ -1.89
HOXC8P31273 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
HOXC8P31273 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
HOXC8P31273 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
HOXC8P31273 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC8P31273 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC8P31273 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.25□□□□□ -1.89
HOXC8P31273 RNU6-1027P-201ENST00000383998 107 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
HOXC8P31273 CCNG1P1-201ENST00000406783 885 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 AC078974.1-201ENST00000411597 223 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC8P31273 BX295541.1-201ENST00000417774 250 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 NUP35P1-201ENST00000422734 947 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXC8P31273 ISCA1P6-201ENST00000427740 390 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXC8P31273 RPS24P13-201ENST00000442520 397 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC8P31273 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC8P31273 SNRPGP6-201ENST00000451124 220 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 AC108938.1-201ENST00000451204 136 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC8P31273 AC105252.1-201ENST00000503089 286 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.25□□□□□ -1.89
HOXC8P31273 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXC8P31273 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC8P31273 RNU6-1282P-201ENST00000516735 96 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 RNU2-46P-201ENST00000517038 113 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
HOXC8P31273 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC8P31273 AC022616.6-201ENST00000520479 119 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC8P31273 AC107016.2-201ENST00000547968 190 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 DNAJC8P1-201ENST00000554535 372 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.25□□□□□ -1.89
HOXC8P31273 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.25□□□□□ -1.89
HOXC8P31273 AC024153.1-201ENST00000603103 365 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 AC013553.2-201ENST00000604244 589 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 AC138649.3-201ENST00000622154 254 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 AL160394.1-201ENST00000624765 724 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 SEPT14P19-203ENST00000633205 211 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HOXC8P31273 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.25□□□□□ -1.89
HOXC8P31273 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXC8P31273 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.25□□□□□ -1.89
HOXC8P31273 AP003122.5-201ENST00000527668 3766 ntBASIC3.25□□□□□ -1.89
HOXC8P31273 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
HOXC8P31273 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.24□□□□□ -1.89
HOXC8P31273 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
HOXC8P31273 U8.3-201ENST00000363321 132 ntBASIC3.24□□□□□ -1.89
HOXC8P31273 MIR184-201ENST00000384962 84 ntBASIC3.24□□□□□ -1.89
HOXC8P31273 MIR325-201ENST00000385260 98 ntBASIC3.24□□□□□ -1.89
HOXC8P31273 RNA5SP252-201ENST00000391131 119 ntBASIC3.24□□□□□ -1.89
HOXC8P31273 RN7SKP285-201ENST00000410137 318 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 135.3 ms