Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.79□□□□□ -1.96
SHC1P29353 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.79□□□□□ -1.96
SHC1P29353 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC2.79□□□□□ -1.96
SHC1P29353 AL157687.1-201ENST00000554853 619 ntBASIC2.79□□□□□ -1.96
SHC1P29353 OR4T1P-201ENST00000554933 911 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AL121579.1-201ENST00000555129 305 ntBASIC2.79□□□□□ -1.96
SHC1P29353 SUB1P2-201ENST00000556401 297 ntBASIC2.79□□□□□ -1.96
SHC1P29353 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.79□□□□□ -1.96
SHC1P29353 AC055876.1-202ENST00000567053 138 ntBASIC2.79□□□□□ -1.96
SHC1P29353 MIR3200-201ENST00000580767 85 ntBASIC2.79□□□□□ -1.96
SHC1P29353 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.79□□□□□ -1.96
SHC1P29353 AC068790.3-201ENST00000602988 553 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AC012507.3-201ENST00000603556 477 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AC025449.1-201ENST00000603896 529 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AL390240.1-201ENST00000612950 384 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AC002550.2-201ENST00000621246 394 ntBASIC2.79□□□□□ -1.96
SHC1P29353 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.79□□□□□ -1.96
SHC1P29353 DUXAP9-208ENST00000622815 614 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AC099506.2-201ENST00000623074 221 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AL008636.1-201ENST00000625038 1018 ntBASIC2.79□□□□□ -1.96
SHC1P29353 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.79□□□□□ -1.96
SHC1P29353 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.79□□□□□ -1.96
SHC1P29353 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.79□□□□□ -1.96
SHC1P29353 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.79□□□□□ -1.96
SHC1P29353 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SHC1P29353 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.78□□□□□ -1.96
SHC1P29353 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHC1P29353 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SHC1P29353 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SHC1P29353 Y_RNA.38-201ENST00000362617 102 ntBASIC2.78□□□□□ -1.96
SHC1P29353 RNU6-534P-201ENST00000364877 106 ntBASIC2.78□□□□□ -1.96
SHC1P29353 Y_RNA.295-201ENST00000364918 102 ntBASIC2.78□□□□□ -1.96
SHC1P29353 RNU6-456P-201ENST00000384493 107 ntBASIC2.78□□□□□ -1.96
SHC1P29353 MIR491-201ENST00000384877 84 ntBASIC2.78□□□□□ -1.96
SHC1P29353 FGFR1OP2P1-201ENST00000395943 500 ntBASIC2.78□□□□□ -1.96
SHC1P29353 RNU4-65P-201ENST00000410473 140 ntBASIC2.78□□□□□ -1.96
SHC1P29353 AC138393.2-201ENST00000414742 246 ntBASIC2.78□□□□□ -1.96
SHC1P29353 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.78□□□□□ -1.96
SHC1P29353 CCDC58P2-201ENST00000417131 366 ntBASIC2.78□□□□□ -1.96
SHC1P29353 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.78□□□□□ -1.96
SHC1P29353 AC093151.1-201ENST00000427711 313 ntBASIC2.78□□□□□ -1.96
SHC1P29353 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.78□□□□□ -1.96
SHC1P29353 RPL23AP30-201ENST00000432419 501 ntBASIC2.78□□□□□ -1.96
SHC1P29353 HMGN2P20-201ENST00000437531 273 ntBASIC2.78□□□□□ -1.96
SHC1P29353 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.78□□□□□ -1.96
SHC1P29353 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.78□□□□□ -1.96
SHC1P29353 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.78□□□□□ -1.96
SHC1P29353 SSXP4-201ENST00000451349 245 ntBASIC2.78□□□□□ -1.96
SHC1P29353 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.78□□□□□ -1.96
SHC1P29353 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.78□□□□□ -1.96
SHC1P29353 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.78□□□□□ -1.96
SHC1P29353 AC012181.1-201ENST00000479895 423 ntBASIC2.78□□□□□ -1.96
SHC1P29353 RPS29P25-201ENST00000481709 171 ntBASIC2.78□□□□□ -1.96
SHC1P29353 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
SHC1P29353 AC026427.2-201ENST00000506228 536 ntBASIC2.78□□□□□ -1.96
SHC1P29353 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.78□□□□□ -1.96
SHC1P29353 AC008885.1-201ENST00000514930 301 ntBASIC2.78□□□□□ -1.96
SHC1P29353 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.78□□□□□ -1.96
SHC1P29353 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.78□□□□□ -1.96
SHC1P29353 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.78□□□□□ -1.96
SHC1P29353 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2.78□□□□□ -1.96
SHC1P29353 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.78□□□□□ -1.96
SHC1P29353 AP003034.1-201ENST00000534621 422 ntBASIC2.78□□□□□ -1.96
SHC1P29353 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.78□□□□□ -1.96
SHC1P29353 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.78□□□□□ -1.96
SHC1P29353 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.78□□□□□ -1.96
SHC1P29353 SETP7-201ENST00000552169 453 ntBASIC2.78□□□□□ -1.96
SHC1P29353 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.78□□□□□ -1.96
SHC1P29353 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.78□□□□□ -1.96
SHC1P29353 MIR4474-201ENST00000579189 78 ntBASIC2.78□□□□□ -1.96
SHC1P29353 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.78□□□□□ -1.96
SHC1P29353 AC007363.1-201ENST00000604736 620 ntBASIC2.78□□□□□ -1.96
SHC1P29353 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.78□□□□□ -1.96
SHC1P29353 AL357078.3-201ENST00000607528 618 ntBASIC2.78□□□□□ -1.96
SHC1P29353 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.78□□□□□ -1.96
SHC1P29353 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.78□□□□□ -1.96
SHC1P29353 AC245517.5-201ENST00000611529 162 ntBASIC2.78□□□□□ -1.96
SHC1P29353 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.78□□□□□ -1.96
SHC1P29353 AC092794.2-201ENST00000620933 563 ntBASIC2.78□□□□□ -1.96
SHC1P29353 AL360181.4-201ENST00000621752 134 ntBASIC2.78□□□□□ -1.96
SHC1P29353 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
SHC1P29353 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SHC1P29353 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.77□□□□□ -1.97
SHC1P29353 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.77□□□□□ -1.97
SHC1P29353 AC073325.2-201ENST00000339545 159 ntBASIC2.77□□□□□ -1.97
SHC1P29353 RNY3P13-201ENST00000365542 102 ntBASIC2.77□□□□□ -1.97
SHC1P29353 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.77□□□□□ -1.97
SHC1P29353 RNU1-39P-201ENST00000383897 165 ntBASIC2.77□□□□□ -1.97
SHC1P29353 SNORD15B-201ENST00000384714 146 ntBASIC2.77□□□□□ -1.97
SHC1P29353 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SHC1P29353 FGF7P8-201ENST00000402994 292 ntBASIC2.77□□□□□ -1.97
SHC1P29353 USP9YP27-201ENST00000418455 438 ntBASIC2.77□□□□□ -1.97
SHC1P29353 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.77□□□□□ -1.97
SHC1P29353 AC119618.1-201ENST00000434191 222 ntBASIC2.77□□□□□ -1.97
SHC1P29353 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SHC1P29353 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.77□□□□□ -1.97
SHC1P29353 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.77□□□□□ -1.97
SHC1P29353 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.77□□□□□ -1.97
SHC1P29353 RNU6-420P-201ENST00000458780 107 ntBASIC2.77□□□□□ -1.97
SHC1P29353 RPL23AP41-201ENST00000484754 458 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms