Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.2□□□□□ -1.74
COL6A2P12110 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL6A2P12110 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.2□□□□□ -1.74
COL6A2P12110 UBE2L2-201ENST00000254302 429 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 MIR331-201ENST00000362302 94 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 Y_RNA.148-201ENST00000363557 117 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL6A2P12110 Y_RNA.404-201ENST00000383978 102 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 RNU6-890P-201ENST00000384121 107 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 RNU6-398P-201ENST00000384143 109 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 MIR578-201ENST00000384828 96 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 MIR514A1-201ENST00000385133 98 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL6A2P12110 Y_RNA.594-201ENST00000410373 140 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 RNU6-293P-201ENST00000411259 106 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.2□□□□□ -1.74
COL6A2P12110 Z99755.1-201ENST00000414048 380 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC4.2□□□□□ -1.74
COL6A2P12110 AC063979.1-201ENST00000415539 377 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AL353621.1-201ENST00000418219 243 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AL356387.2-201ENST00000422272 243 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AL358176.2-201ENST00000425769 204 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AL451062.2-201ENST00000427515 271 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.2□□□□□ -1.74
COL6A2P12110 NOTCH2P1-201ENST00000443481 624 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AC073264.2-201ENST00000448886 166 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC4.2□□□□□ -1.74
COL6A2P12110 RPS24P6-201ENST00000452670 400 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.2□□□□□ -1.74
COL6A2P12110 snoU13.24-201ENST00000458998 104 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 RN7SL354P-201ENST00000469282 294 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 RN7SL459P-201ENST00000481078 302 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AL592156.1-201ENST00000508758 304 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.2□□□□□ -1.74
COL6A2P12110 MIR2114-201ENST00000516645 80 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 Y_RNA.720-201ENST00000517166 92 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL6A2P12110 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.2□□□□□ -1.74
COL6A2P12110 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.2□□□□□ -1.74
COL6A2P12110 AC025423.5-201ENST00000550230 219 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 DNAJC8P1-201ENST00000554535 372 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.2□□□□□ -1.74
COL6A2P12110 MIR3921-201ENST00000577308 85 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.2□□□□□ -1.74
COL6A2P12110 AC020914.4-201ENST00000597690 277 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AC113403.1-201ENST00000604910 193 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 HMGB1P50-201ENST00000605814 607 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AC012603.1-201ENST00000606424 528 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AC107294.1-201ENST00000609524 467 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AL161423.1-201ENST00000613700 262 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 AC083806.3-201ENST00000614016 455 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.2□□□□□ -1.74
COL6A2P12110 AL031601.2-202ENST00000622650 282 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.2□□□□□ -1.74
COL6A2P12110 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL6A2P12110 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.2□□□□□ -1.74
COL6A2P12110 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL6A2P12110 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.2□□□□□ -1.74
COL6A2P12110 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.2□□□□□ -1.74
COL6A2P12110 AC005183.1-201ENST00000603687 1979 ntBASIC4.2□□□□□ -1.74
COL6A2P12110 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
COL6A2P12110 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL6A2P12110 Y_RNA.158-201ENST00000363651 101 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 RNU6-1303P-201ENST00000364841 107 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 RNU6-1032P-201ENST00000384100 107 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 Y_RNA.463-201ENST00000384271 102 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 RNU6-463P-201ENST00000384340 107 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 RNU6-1105P-201ENST00000384774 107 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 RPS16P5-201ENST00000406501 404 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 AL590139.1-201ENST00000416267 400 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 AL157831.1-201ENST00000426134 473 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.19□□□□□ -1.74
COL6A2P12110 AC236972.1-201ENST00000433225 199 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 AC091390.1-201ENST00000433904 331 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 HSPD1P21-201ENST00000436541 245 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 USP9YP7-201ENST00000436723 430 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 RPS24P13-201ENST00000442520 397 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.19□□□□□ -1.74
COL6A2P12110 USP9YP32-201ENST00000452432 430 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 MIR2053-201ENST00000459295 91 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 RPL21P126-201ENST00000470049 478 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.19□□□□□ -1.74
COL6A2P12110 AL135752.1-201ENST00000479477 471 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.19□□□□□ -1.74
COL6A2P12110 AC021146.2-201ENST00000504736 556 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 SUMO2P6-201ENST00000505273 288 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 MTND3P25-201ENST00000509243 135 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 AC008716.1-201ENST00000511084 513 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 PTP4A1P4-201ENST00000512479 322 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 RNU6-1046P-201ENST00000516538 107 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL6A2P12110 AC023442.1-201ENST00000531247 422 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.19□□□□□ -1.74
COL6A2P12110 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.19□□□□□ -1.74
COL6A2P12110 AL360157.1-201ENST00000565962 87 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 MIR1273C-201ENST00000578669 77 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.19□□□□□ -1.74
COL6A2P12110 AC103858.2-201ENST00000621471 543 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms