Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AC006023.1-201ENST00000603944 259 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AC007363.1-201ENST00000604736 620 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AC093788.1-201ENST00000609356 927 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.47□□□□□ -1.85
MMP3P08254 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
MMP3P08254 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.47□□□□□ -1.85
MMP3P08254 AC007998.5-201ENST00000622938 237 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.47□□□□□ -1.85
MMP3P08254 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.47□□□□□ -1.85
MMP3P08254 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.47□□□□□ -1.85
MMP3P08254 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MMP3P08254 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
MMP3P08254 AL035425.3-201ENST00000564206 4996 ntBASIC3.47□□□□□ -1.85
MMP3P08254 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.47□□□□□ -1.85
MMP3P08254 AF117829.1-206ENST00000621883 3802 ntBASIC3.47□□□□□ -1.85
MMP3P08254 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
MMP3P08254 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.85
MMP3P08254 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.46□□□□□ -1.85
MMP3P08254 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.46□□□□□ -1.86
MMP3P08254 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.46□□□□□ -1.86
MMP3P08254 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.46□□□□□ -1.86
MMP3P08254 AC004925.1-201ENST00000624256 2706 ntBASIC3.46□□□□□ -1.86
MMP3P08254 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
MMP3P08254 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
MMP3P08254 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MMP3P08254 Y_RNA.38-201ENST00000362617 102 ntBASIC3.46□□□□□ -1.86
MMP3P08254 RNY4P14-201ENST00000363656 96 ntBASIC3.46□□□□□ -1.86
MMP3P08254 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MMP3P08254 Y_RNA.390-201ENST00000383932 102 ntBASIC3.46□□□□□ -1.86
MMP3P08254 MIR558-201ENST00000384920 94 ntBASIC3.46□□□□□ -1.86
MMP3P08254 RPS4XP8-201ENST00000402039 771 ntBASIC3.46□□□□□ -1.86
MMP3P08254 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.46□□□□□ -1.86
MMP3P08254 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.46□□□□□ -1.86
MMP3P08254 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MMP3P08254 MTCO1P39-201ENST00000426148 480 ntBASIC3.46□□□□□ -1.86
MMP3P08254 MTATP6P4-201ENST00000427725 675 ntBASIC3.46□□□□□ -1.86
MMP3P08254 OR2AS1P-201ENST00000427827 319 ntBASIC3.46□□□□□ -1.86
MMP3P08254 TIMM9P3-201ENST00000428659 274 ntBASIC3.46□□□□□ -1.86
MMP3P08254 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.46□□□□□ -1.86
MMP3P08254 RPS20P5-201ENST00000434808 360 ntBASIC3.46□□□□□ -1.86
MMP3P08254 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.46□□□□□ -1.86
MMP3P08254 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.46□□□□□ -1.86
MMP3P08254 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.46□□□□□ -1.86
MMP3P08254 AC233702.1-201ENST00000482905 502 ntBASIC3.46□□□□□ -1.86
MMP3P08254 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
MMP3P08254 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.46□□□□□ -1.86
MMP3P08254 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.46□□□□□ -1.86
MMP3P08254 RNU6-1281P-201ENST00000516223 105 ntBASIC3.46□□□□□ -1.86
MMP3P08254 RNU6-1073P-201ENST00000517182 106 ntBASIC3.46□□□□□ -1.86
MMP3P08254 RNU6-840P-201ENST00000517275 65 ntBASIC3.46□□□□□ -1.86
MMP3P08254 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
MMP3P08254 AP001646.1-201ENST00000527936 915 ntBASIC3.46□□□□□ -1.86
MMP3P08254 AC109635.3-201ENST00000529536 185 ntBASIC3.46□□□□□ -1.86
MMP3P08254 OR4R1P-201ENST00000529879 463 ntBASIC3.46□□□□□ -1.86
MMP3P08254 AC104383.1-201ENST00000530297 370 ntBASIC3.46□□□□□ -1.86
MMP3P08254 SNORD84-203ENST00000584275 78 ntBASIC3.46□□□□□ -1.86
MMP3P08254 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.46□□□□□ -1.86
MMP3P08254 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.46□□□□□ -1.86
MMP3P08254 DPPA3P3-201ENST00000603842 430 ntBASIC3.46□□□□□ -1.86
MMP3P08254 AP001330.4-201ENST00000604350 154 ntBASIC3.46□□□□□ -1.86
MMP3P08254 AP002360.4-201ENST00000606980 481 ntBASIC3.46□□□□□ -1.86
MMP3P08254 AP001330.5-201ENST00000607176 411 ntBASIC3.46□□□□□ -1.86
MMP3P08254 AL589994.2-201ENST00000621124 579 ntBASIC3.46□□□□□ -1.86
MMP3P08254 AC048347.1-201ENST00000624621 427 ntBASIC3.46□□□□□ -1.86
MMP3P08254 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
MMP3P08254 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.46□□□□□ -1.86
MMP3P08254 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.46□□□□□ -1.86
MMP3P08254 AC009812.4-201ENST00000569134 1805 ntBASIC3.46□□□□□ -1.86
MMP3P08254 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
MMP3P08254 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
MMP3P08254 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
MMP3P08254 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.45□□□□□ -1.86
MMP3P08254 TAB3P1-202ENST00000452645 1634 ntBASIC3.45□□□□□ -1.86
MMP3P08254 AC000403.1-201ENST00000613696 3585 ntBASIC3.45□□□□□ -1.86
MMP3P08254 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.45□□□□□ -1.86
MMP3P08254 HSPE1P11-201ENST00000339579 310 ntBASIC3.45□□□□□ -1.86
MMP3P08254 SNORA31-201ENST00000362607 130 ntBASIC3.45□□□□□ -1.86
MMP3P08254 RNU6-1120P-201ENST00000362988 108 ntBASIC3.45□□□□□ -1.86
MMP3P08254 RNU6-1097P-201ENST00000363586 107 ntBASIC3.45□□□□□ -1.86
MMP3P08254 RNU5E-6P-201ENST00000365574 115 ntBASIC3.45□□□□□ -1.86
MMP3P08254 RNU6-76P-201ENST00000384060 104 ntBASIC3.45□□□□□ -1.86
MMP3P08254 RNU6-1158P-201ENST00000391167 107 ntBASIC3.45□□□□□ -1.86
MMP3P08254 AC110754.1-201ENST00000399740 601 ntBASIC3.45□□□□□ -1.86
MMP3P08254 AL359634.1-202ENST00000404721 284 ntBASIC3.45□□□□□ -1.86
MMP3P08254 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.45□□□□□ -1.86
MMP3P08254 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.45□□□□□ -1.86
MMP3P08254 AL121871.1-201ENST00000443413 436 ntBASIC3.45□□□□□ -1.86
MMP3P08254 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
MMP3P08254 AC079781.2-201ENST00000446424 169 ntBASIC3.45□□□□□ -1.86
MMP3P08254 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.45□□□□□ -1.86
MMP3P08254 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.45□□□□□ -1.86
MMP3P08254 RPS24P6-201ENST00000452670 400 ntBASIC3.45□□□□□ -1.86
MMP3P08254 RPS29P15-201ENST00000458329 171 ntBASIC3.45□□□□□ -1.86
MMP3P08254 RPL21P8-201ENST00000465083 535 ntBASIC3.45□□□□□ -1.86
MMP3P08254 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.45□□□□□ -1.86
MMP3P08254 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.45□□□□□ -1.86
MMP3P08254 AC078918.1-201ENST00000498515 228 ntBASIC3.45□□□□□ -1.86
MMP3P08254 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.45□□□□□ -1.86
MMP3P08254 AC116353.2-201ENST00000505332 712 ntBASIC3.45□□□□□ -1.86
MMP3P08254 RNU2-10P-201ENST00000516375 211 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms