Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC087821.2-201ENST00000637086 450 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 AC068700.1-201ENST00000565862 3754 ntBASIC1.52□□□□□ -2.17
COL4A1P02462 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
COL4A1P02462 Y_RNA.205-201ENST00000364128 113 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 RNU6-921P-201ENST00000384361 107 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 BTF3P8-201ENST00000414577 526 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 VN1R108P-201ENST00000431580 830 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC093752.1-206ENST00000511823 336 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AF131216.2-201ENST00000512316 564 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 RNU6-202P-201ENST00000515998 96 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 ARL2BPP5-201ENST00000523141 481 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AP000907.2-201ENST00000530827 353 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.51□□□□□ -2.17
COL4A1P02462 ZNF971P-201ENST00000562068 1249 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.51□□□□□ -2.17
COL4A1P02462 MTATP6P2-201ENST00000603319 678 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AC136443.5-201ENST00000603741 370 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC018926.1-201ENST00000616335 435 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AL512427.1-201ENST00000618593 349 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC106858.1-201ENST00000637497 429 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
COL4A1P02462 AP000560.1-201ENST00000624150 1937 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
COL4A1P02462 RNA5SP258-201ENST00000362750 119 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 RNU6-216P-201ENST00000363282 104 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 RNU6-1300P-201ENST00000391046 108 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 ERHP2-201ENST00000402323 299 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 SSXP10-201ENST00000402595 565 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AL136372.1-201ENST00000403060 228 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC027644.1-201ENST00000419595 298 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AC099677.1-201ENST00000420575 175 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 USP9YP21-201ENST00000420603 432 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC004022.1-201ENST00000447766 1066 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AL136380.1-201ENST00000447970 162 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 AL353691.1-201ENST00000451332 387 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 MTCYBP35-201ENST00000503630 1137 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 HMGB1P22-201ENST00000505315 124 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 CDC42P4-201ENST00000510507 563 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.51□□□□□ -2.17
COL4A1P02462 RNA5SP135-201ENST00000517019 125 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 RNU6-1073P-201ENST00000517182 106 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC022690.1-201ENST00000526681 550 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 OR5AQ1P-201ENST00000527596 927 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 MTCYBP41-201ENST00000528913 1123 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 LRRC6P1-201ENST00000532188 885 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC087897.1-201ENST00000550134 156 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 EEF1B2P4-201ENST00000551398 348 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 MTCYBP27-201ENST00000555160 670 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 AC013553.2-201ENST00000604244 589 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 MIR6840-201ENST00000611937 71 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 AC091895.1-201ENST00000624494 256 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.51□□□□□ -2.17
COL4A1P02462 MTND2P41-201ENST00000637599 773 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 U6.101-201ENST00000637707 76 ntBASIC1.51□□□□□ -2.17
COL4A1P02462 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
COL4A1P02462 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.5□□□□□ -2.17
COL4A1P02462 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
COL4A1P02462 SNRPEP3-201ENST00000338402 276 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 Y_RNA.178-201ENST00000363832 102 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 RNU6-1032P-201ENST00000384100 107 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 MIR144-201ENST00000384886 86 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 RNU6-837P-201ENST00000391056 108 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AL603865.2-201ENST00000401679 213 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 RPL7P27-201ENST00000403775 720 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AL033519.2-201ENST00000403958 392 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 RNU6-712P-201ENST00000410558 100 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.5□□□□□ -2.17
COL4A1P02462 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.5□□□□□ -2.17
COL4A1P02462 MTCO3P1-205ENST00000422088 832 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AC233728.2-201ENST00000425348 757 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC1.5□□□□□ -2.17
COL4A1P02462 IFNA20P-201ENST00000436840 528 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AP000949.1-201ENST00000438328 629 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 MTCYBP42-201ENST00000444653 1130 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AC244505.3-201ENST00000454598 187 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 snoU109.3-201ENST00000459477 145 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AC016550.1-201ENST00000505348 785 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.5□□□□□ -2.17
COL4A1P02462 RN7SKP265-201ENST00000516448 223 ntBASIC1.5□□□□□ -2.17
COL4A1P02462 OR5AK1P-201ENST00000524837 922 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms