Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL2A1P02458 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL2A1P02458 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.01□□□□□ -1.93
COL2A1P02458 AC004925.1-201ENST00000624256 2706 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.01□□□□□ -1.93
COL2A1P02458 Y_RNA.1-201ENST00000352915 104 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 SNORD56.2-201ENST00000363242 71 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 Y_RNA.142-201ENST00000363491 102 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 Y_RNA.263-201ENST00000364659 114 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 RNU6-657P-201ENST00000383904 107 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 RNU6-1122P-201ENST00000384449 107 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 AC069218.2-201ENST00000411665 344 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.01□□□□□ -1.93
COL2A1P02458 FCF1P2-201ENST00000415284 583 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.01□□□□□ -1.93
COL2A1P02458 AC009302.1-201ENST00000417147 390 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.01□□□□□ -1.93
COL2A1P02458 RPL31P35-201ENST00000431058 377 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.01□□□□□ -1.93
COL2A1P02458 PGBD4P3-201ENST00000440731 581 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC3.01□□□□□ -1.93
COL2A1P02458 ARPC3P5-201ENST00000448802 534 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL2A1P02458 NDUFA5P7-201ENST00000452914 242 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 RPS20P24-201ENST00000457473 361 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 RPL9P32-201ENST00000464118 620 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
COL2A1P02458 MTCYBP18-201ENST00000501056 747 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 KLHL2P1-201ENST00000508691 521 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.01□□□□□ -1.93
COL2A1P02458 AC026412.2-201ENST00000512270 1075 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 RNU6-583P-201ENST00000516012 92 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 RNU2-46P-201ENST00000517038 113 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.01□□□□□ -1.93
COL2A1P02458 DEFB131D-201ENST00000526803 184 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 AP003181.2-201ENST00000528941 181 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 AC022878.1-201ENST00000530684 149 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 SLC2A13P1-201ENST00000531560 322 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.01□□□□□ -1.93
COL2A1P02458 AC136618.2-201ENST00000575091 400 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 MIR544B-201ENST00000582372 78 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 HMGN1P30-201ENST00000589286 268 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 AL009028.1-201ENST00000604895 802 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 AC116563.2-201ENST00000624751 535 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.01□□□□□ -1.93
COL2A1P02458 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3□□□□□ -1.93
COL2A1P02458 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL2A1P02458 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
COL2A1P02458 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
COL2A1P02458 Y_RNA.25-201ENST00000362528 102 ntBASIC3□□□□□ -1.93
COL2A1P02458 U8.3-201ENST00000363321 132 ntBASIC3□□□□□ -1.93
COL2A1P02458 SNORA36C-201ENST00000384289 132 ntBASIC3□□□□□ -1.93
COL2A1P02458 Y_RNA.573-201ENST00000384763 105 ntBASIC3□□□□□ -1.93
COL2A1P02458 AC068050.1-201ENST00000394891 380 ntBASIC3□□□□□ -1.93
COL2A1P02458 AL359511.1-201ENST00000402970 211 ntBASIC3□□□□□ -1.93
COL2A1P02458 Z98742.3-201ENST00000418637 326 ntBASIC3□□□□□ -1.93
COL2A1P02458 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3□□□□□ -1.93
COL2A1P02458 AC002486.1-201ENST00000435098 391 ntBASIC3□□□□□ -1.93
COL2A1P02458 RPS7P5-201ENST00000441482 581 ntBASIC3□□□□□ -1.93
COL2A1P02458 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3□□□□□ -1.93
COL2A1P02458 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3□□□□□ -1.93
COL2A1P02458 Z82190.1-201ENST00000454534 490 ntBASIC3□□□□□ -1.93
COL2A1P02458 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3□□□□□ -1.93
COL2A1P02458 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3□□□□□ -1.93
COL2A1P02458 AP000893.1-201ENST00000474462 794 ntBASIC3□□□□□ -1.93
COL2A1P02458 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3□□□□□ -1.93
COL2A1P02458 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
COL2A1P02458 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3□□□□□ -1.93
COL2A1P02458 AC022447.3-201ENST00000506865 495 ntBASIC3□□□□□ -1.93
COL2A1P02458 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3□□□□□ -1.93
COL2A1P02458 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3□□□□□ -1.93
COL2A1P02458 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3□□□□□ -1.93
COL2A1P02458 AP003072.1-201ENST00000531740 145 ntBASIC3□□□□□ -1.93
COL2A1P02458 AC090502.2-201ENST00000549267 280 ntBASIC3□□□□□ -1.93
COL2A1P02458 RPL21P5-201ENST00000554662 472 ntBASIC3□□□□□ -1.93
COL2A1P02458 AC022884.3-201ENST00000579571 248 ntBASIC3□□□□□ -1.93
COL2A1P02458 AC010928.3-201ENST00000587712 541 ntBASIC3□□□□□ -1.93
COL2A1P02458 AC060780.3-201ENST00000589464 80 ntBASIC3□□□□□ -1.93
COL2A1P02458 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3□□□□□ -1.93
COL2A1P02458 AL133255.1-201ENST00000606374 441 ntBASIC3□□□□□ -1.93
COL2A1P02458 AC103810.6-201ENST00000606708 136 ntBASIC3□□□□□ -1.93
COL2A1P02458 AC139792.3-201ENST00000623525 224 ntBASIC3□□□□□ -1.93
COL2A1P02458 MIR1321-201ENST00000637766 79 ntBASIC3□□□□□ -1.93
COL2A1P02458 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
COL2A1P02458 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3□□□□□ -1.93
COL2A1P02458 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL2A1P02458 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3□□□□□ -1.93
COL2A1P02458 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL2A1P02458 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC2.99□□□□□ -1.93
COL2A1P02458 AC092881.1-201ENST00000638218 2733 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.99□□□□□ -1.93
COL2A1P02458 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.99□□□□□ -1.93
COL2A1P02458 RNU6-1085P-201ENST00000363576 107 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 RNU4-7P-201ENST00000364758 141 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 RNU6-282P-201ENST00000365357 103 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 MT-TD-201ENST00000387419 68 ntBASIC2.99□□□□□ -1.93
COL2A1P02458 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL2A1P02458 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.99□□□□□ -1.93
COL2A1P02458 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL2A1P02458 SPA17P1-201ENST00000416656 452 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms