Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 MIR4769-201ENST00000584126 77 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
CLDN9O95484 AC061975.8-201ENST00000587058 721 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AC068790.3-201ENST00000602988 553 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AC103710.1-201ENST00000610003 901 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN9O95484 AL136313.1-201ENST00000624804 202 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.34□□□□□ -2.03
CLDN9O95484 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 AC103706.2-201ENST00000638080 240 ntBASIC2.34□□□□□ -2.03
CLDN9O95484 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CLDN9O95484 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
CLDN9O95484 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.34□□□□□ -2.04
CLDN9O95484 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
CLDN9O95484 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN9O95484 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN9O95484 MIR21-201ENST00000362134 72 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 RNA5SP68-201ENST00000363885 119 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 RNU6-83P-201ENST00000384568 112 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 MIR518C-201ENST00000384822 101 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN9O95484 NDUFS5P4-201ENST00000412983 318 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 VPS26BP1-201ENST00000417155 755 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 SKA2P1-201ENST00000425592 390 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 FCF1P1-201ENST00000432690 571 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN9O95484 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN9O95484 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CLDN9O95484 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN9O95484 AC055855.1-201ENST00000489563 579 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 RPL37P25-201ENST00000507308 276 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 RNU5F-8P-201ENST00000515941 111 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 SNORA31.18-201ENST00000517043 134 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 RN7SKP258-201ENST00000517151 304 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 SCARNA11.3-201ENST00000517276 130 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.33□□□□□ -2.04
CLDN9O95484 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN9O95484 AC068587.4-201ENST00000533893 186 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN9O95484 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN9O95484 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC2.33□□□□□ -2.04
CLDN9O95484 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN9O95484 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN9O95484 MIR3908-201ENST00000579798 126 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 AL356280.1-201ENST00000603614 379 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 AC098826.3-201ENST00000603823 466 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 AL645944.1-201ENST00000603857 493 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 AL161798.1-201ENST00000604630 131 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 AC067747.1-201ENST00000608026 250 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 OR10AB1P-201ENST00000609613 938 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CLDN9O95484 AC110491.1-201ENST00000562191 2010 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.33□□□□□ -2.04
CLDN9O95484 ZNF736P9Y-201ENST00000439586 1345 ntBASIC2.33□□□□□ -2.04
CLDN9O95484 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.33□□□□□ -2.04
CLDN9O95484 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.33□□□□□ -2.04
CLDN9O95484 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.33□□□□□ -2.04
CLDN9O95484 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN9O95484 AC069528.2-201ENST00000624849 1991 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN9O95484 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN9O95484 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN9O95484 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN9O95484 RNA5SP88-201ENST00000365560 109 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 RNU6-157P-201ENST00000383957 107 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 RNU1-73P-201ENST00000383971 164 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 RNU6-769P-201ENST00000384407 104 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 RNU2-68P-201ENST00000410878 191 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN9O95484 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN9O95484 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN9O95484 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN9O95484 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN9O95484 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN9O95484 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN9O95484 AL513328.1-201ENST00000446460 224 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 TRBV12-1-201ENST00000479785 344 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 AC112673.1-201ENST00000513168 575 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 AP003467.2-201ENST00000520175 319 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN9O95484 AP004247.1-201ENST00000531556 1289 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN9O95484 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN9O95484 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.32□□□□□ -2.04
CLDN9O95484 AC024619.4-201ENST00000580924 316 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.32□□□□□ -2.04
CLDN9O95484 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.32□□□□□ -2.04
CLDN9O95484 AP000403.1-201ENST00000603349 851 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 BCRP9-201ENST00000605312 388 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 AC135507.1-201ENST00000607214 561 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 AC091965.4-201ENST00000607691 587 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN9O95484 MIR6817-201ENST00000615588 66 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CLDN9O95484 AC004520.1-201ENST00000608362 1413 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
CLDN9O95484 AC010889.1-201ENST00000566193 2666 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 ELF2P3-201ENST00000445099 1506 ntBASIC2.32□□□□□ -2.04
CLDN9O95484 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms