Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC135721.1-201ENST00000497954 479 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
CTDNEP1O95476 AL359273.1-201ENST00000510918 627 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 RPL23AP94-201ENST00000512518 302 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 RNU6-528P-201ENST00000516926 100 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 ZNF321P-202ENST00000550843 495 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 MIR3921-201ENST00000577308 85 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 AC090615.1-201ENST00000577519 154 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 AC021171.1-201ENST00000603137 706 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 AL031176.1-201ENST00000604554 466 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 AC018714.1-201ENST00000605028 208 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 AL139344.1-201ENST00000605228 195 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 AC090186.1-201ENST00000605991 572 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 AL590099.1-201ENST00000615276 138 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 AC103706.2-201ENST00000638080 240 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.26□□□□□ -2.05
CTDNEP1O95476 AC009812.4-201ENST00000569134 1805 ntBASIC2.26□□□□□ -2.05
CTDNEP1O95476 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
CTDNEP1O95476 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
CTDNEP1O95476 RNU6-462P-201ENST00000362659 105 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 RNU1-105P-201ENST00000363470 161 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 RNU6-723P-201ENST00000383973 107 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 RNU6-1207P-201ENST00000384343 107 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 RNA5SP354-201ENST00000391247 136 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 MIR1290-201ENST00000408735 78 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 RNU2-20P-201ENST00000410425 191 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 RPL17P12-201ENST00000413391 526 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AL139413.1-201ENST00000421309 217 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 BEND7P1-201ENST00000422058 457 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 AL022400.1-201ENST00000423946 935 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 RPL7L1P10-201ENST00000427790 463 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AL008629.1-201ENST00000438615 184 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AP000542.1-201ENST00000448473 371 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AL139824.2-201ENST00000458731 1095 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 SNORD121B-201ENST00000458838 81 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 RPL31P60-201ENST00000478450 367 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC113155.1-201ENST00000511141 769 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC024589.1-201ENST00000512207 263 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AP003461.1-201ENST00000528866 78 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AP002770.2-201ENST00000543613 532 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 ACTR3BP3-201ENST00000565577 979 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 UBE2L4-201ENST00000587688 464 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC008751.2-201ENST00000597885 980 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC013444.2-201ENST00000603317 787 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 BCRP9-201ENST00000605312 388 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC002550.2-201ENST00000621246 394 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 AL158801.5-201ENST00000623123 465 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
CTDNEP1O95476 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 AC104454.1-201ENST00000421341 1401 ntBASIC2.25□□□□□ -2.05
CTDNEP1O95476 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CTDNEP1O95476 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 RNA5SP126-201ENST00000365092 109 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 RNU6-301P-201ENST00000384277 107 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 RPS3AP24-201ENST00000407896 734 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CTDNEP1O95476 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 AL593851.1-201ENST00000426171 157 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 AL365496.1-201ENST00000426885 215 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 OR4K11P-201ENST00000431829 904 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 ARPC3P1-201ENST00000437218 533 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.24□□□□□ -2.05
CTDNEP1O95476 RPS27P26-201ENST00000494583 239 ntBASIC2.24□□□□□ -2.05
CTDNEP1O95476 AC104685.1-201ENST00000502445 371 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms