Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.52□□□□□ -2.01
MSH4O15457 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
MSH4O15457 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.52□□□□□ -2.01
MSH4O15457 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MSH4O15457 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MSH4O15457 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.51□□□□□ -2.01
MSH4O15457 Y_RNA.18-201ENST00000362461 102 ntBASIC2.51□□□□□ -2.01
MSH4O15457 SNORD113-6-201ENST00000363345 75 ntBASIC2.51□□□□□ -2.01
MSH4O15457 RNU1-91P-201ENST00000364746 163 ntBASIC2.51□□□□□ -2.01
MSH4O15457 Y_RNA.302-201ENST00000364997 102 ntBASIC2.51□□□□□ -2.01
MSH4O15457 RNU1-109P-201ENST00000383960 147 ntBASIC2.51□□□□□ -2.01
MSH4O15457 RNU6-1200P-201ENST00000384162 107 ntBASIC2.51□□□□□ -2.01
MSH4O15457 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MSH4O15457 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.51□□□□□ -2.01
MSH4O15457 RPS24P7-201ENST00000416921 246 ntBASIC2.51□□□□□ -2.01
MSH4O15457 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.51□□□□□ -2.01
MSH4O15457 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC2.51□□□□□ -2.01
MSH4O15457 AL356320.1-201ENST00000429616 163 ntBASIC2.51□□□□□ -2.01
MSH4O15457 MTND1P20-201ENST00000430341 950 ntBASIC2.51□□□□□ -2.01
MSH4O15457 AL354941.1-201ENST00000438600 464 ntBASIC2.51□□□□□ -2.01
MSH4O15457 MTCYBP3-201ENST00000445588 1137 ntBASIC2.51□□□□□ -2.01
MSH4O15457 OR6C5P-201ENST00000452388 923 ntBASIC2.51□□□□□ -2.01
MSH4O15457 RPL12P25-201ENST00000455592 494 ntBASIC2.51□□□□□ -2.01
MSH4O15457 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.51□□□□□ -2.01
MSH4O15457 AC055855.1-201ENST00000489563 579 ntBASIC2.51□□□□□ -2.01
MSH4O15457 AC009901.1-201ENST00000506703 541 ntBASIC2.51□□□□□ -2.01
MSH4O15457 MTND5P13-201ENST00000513046 1079 ntBASIC2.51□□□□□ -2.01
MSH4O15457 MTCO1P47-201ENST00000523889 1271 ntBASIC2.51□□□□□ -2.01
MSH4O15457 AP000907.2-201ENST00000530827 353 ntBASIC2.51□□□□□ -2.01
MSH4O15457 AL391261.3-201ENST00000557194 520 ntBASIC2.51□□□□□ -2.01
MSH4O15457 AC026464.5-201ENST00000562497 722 ntBASIC2.51□□□□□ -2.01
MSH4O15457 AC009163.5-201ENST00000575421 637 ntBASIC2.51□□□□□ -2.01
MSH4O15457 AC136601.2-201ENST00000604356 474 ntBASIC2.51□□□□□ -2.01
MSH4O15457 UCA1.1-201ENST00000620952 75 ntBASIC2.51□□□□□ -2.01
MSH4O15457 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
MSH4O15457 CCT4P2-201ENST00000233836 1548 ntBASIC2.51□□□□□ -2.01
MSH4O15457 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.51□□□□□ -2.01
MSH4O15457 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.51□□□□□ -2.01
MSH4O15457 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
MSH4O15457 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.5□□□□□ -2.01
MSH4O15457 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
MSH4O15457 SNORD56.5-201ENST00000364281 72 ntBASIC2.5□□□□□ -2.01
MSH4O15457 SNORA70B-201ENST00000384210 135 ntBASIC2.5□□□□□ -2.01
MSH4O15457 RNA5SP425-201ENST00000410336 112 ntBASIC2.5□□□□□ -2.01
MSH4O15457 HMGN2P35-201ENST00000412164 270 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.5□□□□□ -2.01
MSH4O15457 AL135786.1-201ENST00000415892 214 ntBASIC2.5□□□□□ -2.01
MSH4O15457 VPS26BP1-201ENST00000417155 755 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.5□□□□□ -2.01
MSH4O15457 BTF3L4P3-201ENST00000418879 476 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC2.5□□□□□ -2.01
MSH4O15457 USP9YP26-201ENST00000421008 661 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.5□□□□□ -2.01
MSH4O15457 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.5□□□□□ -2.01
MSH4O15457 AL139415.2-201ENST00000431968 163 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.5□□□□□ -2.01
MSH4O15457 LARP1BP3-201ENST00000437229 869 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.5□□□□□ -2.01
MSH4O15457 WASF1P1-201ENST00000447560 1131 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.5□□□□□ -2.01
MSH4O15457 AC087588.1-201ENST00000462203 316 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AL160314.1-201ENST00000490836 438 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.5□□□□□ -2.01
MSH4O15457 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.5□□□□□ -2.01
MSH4O15457 MTATP6P15-201ENST00000527233 835 ntBASIC2.5□□□□□ -2.01
MSH4O15457 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.5□□□□□ -2.01
MSH4O15457 AC007115.1-201ENST00000546853 234 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.5□□□□□ -2.01
MSH4O15457 AC093012.1-202ENST00000549403 582 ntBASIC2.5□□□□□ -2.01
MSH4O15457 MIR4999-201ENST00000585029 91 ntBASIC2.5□□□□□ -2.01
MSH4O15457 HMGN2P15-201ENST00000585707 270 ntBASIC2.5□□□□□ -2.01
MSH4O15457 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.5□□□□□ -2.01
MSH4O15457 AL137847.3-201ENST00000611521 109 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.5□□□□□ -2.01
MSH4O15457 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AC091965.5-201ENST00000624785 342 ntBASIC2.5□□□□□ -2.01
MSH4O15457 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC2.5□□□□□ -2.01
MSH4O15457 AP003399.1-201ENST00000637534 361 ntBASIC2.5□□□□□ -2.01
MSH4O15457 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.5□□□□□ -2.01
MSH4O15457 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.5□□□□□ -2.01
MSH4O15457 RNU4-28P-201ENST00000364739 141 ntBASIC2.49□□□□□ -2.01
MSH4O15457 RNU1-138P-201ENST00000384093 164 ntBASIC2.49□□□□□ -2.01
MSH4O15457 MIR1261-201ENST00000408659 82 ntBASIC2.49□□□□□ -2.01
MSH4O15457 RNU6-193P-201ENST00000410977 107 ntBASIC2.49□□□□□ -2.01
MSH4O15457 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.49□□□□□ -2.01
MSH4O15457 GTF2IP20-201ENST00000431663 360 ntBASIC2.49□□□□□ -2.01
MSH4O15457 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.49□□□□□ -2.01
MSH4O15457 AC009296.1-201ENST00000443146 155 ntBASIC2.49□□□□□ -2.01
MSH4O15457 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.49□□□□□ -2.01
MSH4O15457 MTATP6P30-201ENST00000443540 664 ntBASIC2.49□□□□□ -2.01
MSH4O15457 AC020550.1-201ENST00000447385 163 ntBASIC2.49□□□□□ -2.01
MSH4O15457 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.49□□□□□ -2.01
MSH4O15457 AC027673.1-201ENST00000456245 405 ntBASIC2.49□□□□□ -2.01
MSH4O15457 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.49□□□□□ -2.01
MSH4O15457 SUMO2P6-201ENST00000505273 288 ntBASIC2.49□□□□□ -2.01
MSH4O15457 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.49□□□□□ -2.01
MSH4O15457 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.49□□□□□ -2.01
MSH4O15457 RNA5SP290-201ENST00000517133 127 ntBASIC2.49□□□□□ -2.01
MSH4O15457 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.49□□□□□ -2.01
MSH4O15457 AP000889.2-201ENST00000532684 490 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms