Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 NEFMP1-201ENST00000443423 1006 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 FABP5P15-201ENST00000453566 214 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 RPS26P21-201ENST00000475397 348 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.69□□□□□ -1.82
NPHP1O15259 RPS27P26-201ENST00000494583 239 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 AC114786.4-201ENST00000508771 728 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 AC114781.4-201ENST00000513707 639 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
NPHP1O15259 OSBPL9P5-201ENST00000542581 171 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.69□□□□□ -1.82
NPHP1O15259 RPL21P5-201ENST00000554662 472 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.69□□□□□ -1.82
NPHP1O15259 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.69□□□□□ -1.82
NPHP1O15259 CYCSP39-201ENST00000565821 309 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 AC015871.2-201ENST00000603605 948 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 AC007363.1-201ENST00000604736 620 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.69□□□□□ -1.82
NPHP1O15259 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.69□□□□□ -1.82
NPHP1O15259 AC099654.7-201ENST00000635788 2127 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 AP003399.1-201ENST00000637534 361 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
NPHP1O15259 AL137003.2-201ENST00000606924 2538 ntBASIC3.69□□□□□ -1.82
NPHP1O15259 AP003122.5-201ENST00000527668 3766 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
NPHP1O15259 RNU6-884P-201ENST00000363889 107 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 SMIM11P1-201ENST00000369586 178 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
NPHP1O15259 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.68□□□□□ -1.82
NPHP1O15259 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.68□□□□□ -1.82
NPHP1O15259 AL589872.1-201ENST00000426602 288 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 ISCA1P1-201ENST00000426679 387 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 MTATP6P17-201ENST00000431030 672 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.68□□□□□ -1.82
NPHP1O15259 PGBD4P3-201ENST00000440731 581 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 WASF1P1-201ENST00000447560 1131 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP1O15259 AC108938.1-201ENST00000451204 136 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 AL109933.2-201ENST00000452651 260 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP1O15259 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP1O15259 MTCO2P29-201ENST00000465212 189 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 MRPS17P3-201ENST00000465453 385 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 AC126389.1-201ENST00000477436 290 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 BET1P1-201ENST00000482276 359 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP1O15259 AC010587.1-201ENST00000505809 469 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.68□□□□□ -1.82
NPHP1O15259 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.68□□□□□ -1.82
NPHP1O15259 RNU2-10P-201ENST00000516375 211 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 AC060788.1-201ENST00000521318 469 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 AC087373.1-201ENST00000524920 491 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 AC011979.2-201ENST00000527568 352 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 AL359212.1-201ENST00000556608 614 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.68□□□□□ -1.82
NPHP1O15259 AC009977.1-201ENST00000586015 570 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 MTND4LP5-201ENST00000605152 292 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 Z99129.2-201ENST00000619967 314 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 FRG1KP-201ENST00000623592 341 ntBASIC3.68□□□□□ -1.82
NPHP1O15259 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
NPHP1O15259 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.67□□□□□ -1.82
NPHP1O15259 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.67□□□□□ -1.82
NPHP1O15259 MTND5P7-201ENST00000413558 1798 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 RNU6-512P-201ENST00000364438 103 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 SNORD116-8-201ENST00000384365 95 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 MRPL42P2-201ENST00000403169 426 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 AC009414.1-201ENST00000427200 443 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 ISCA1P2-201ENST00000438679 421 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 SNRPFP4-201ENST00000456366 242 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 RPL37P6-201ENST00000460682 294 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 RPL36AP51-201ENST00000487216 318 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 SUMO2P6-201ENST00000505273 288 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.67□□□□□ -1.82
NPHP1O15259 RNU6-1092P-201ENST00000516955 87 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.67□□□□□ -1.82
NPHP1O15259 AC008739.2-201ENST00000597006 317 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 AC024153.1-201ENST00000603103 365 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.67□□□□□ -1.82
NPHP1O15259 AC078883.4-201ENST00000623218 367 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 AL603839.4-201ENST00000624658 1005 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 AC025048.6-202ENST00000627667 438 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 U2.21-201ENST00000637295 81 ntBASIC3.67□□□□□ -1.82
NPHP1O15259 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NPHP1O15259 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPHP1O15259 RNU1-105P-201ENST00000363470 161 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NPHP1O15259 RNU6-817P-201ENST00000391083 104 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 AL021407.1-201ENST00000404531 386 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 RNA5SP274-201ENST00000410484 108 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.66□□□□□ -1.82
NPHP1O15259 ARL5AP4-201ENST00000430731 512 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 GTF2IP20-201ENST00000431663 360 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 GPM6BP2-201ENST00000432046 144 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 GPM6BP1-201ENST00000446387 144 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 RPS27AP8-201ENST00000452665 445 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 RPL26P9-201ENST00000457466 433 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 SNORD109B-201ENST00000458961 67 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 SNORD109A-201ENST00000459128 67 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 RPS29P20-201ENST00000489592 171 ntBASIC3.66□□□□□ -1.82
NPHP1O15259 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.66□□□□□ -1.82
NPHP1O15259 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms