Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CUX2O14529 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CUX2O14529 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CUX2O14529 CKAP2P1-201ENST00000555477 2049 ntBASIC3.11□□□□□ -1.91
CUX2O14529 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.11□□□□□ -1.91
CUX2O14529 RNU6-28P-201ENST00000362378 107 ntBASIC3.11□□□□□ -1.91
CUX2O14529 RNU1-93P-201ENST00000364704 169 ntBASIC3.11□□□□□ -1.91
CUX2O14529 Y_RNA.408-201ENST00000383987 102 ntBASIC3.11□□□□□ -1.91
CUX2O14529 MIR122-201ENST00000385044 85 ntBASIC3.11□□□□□ -1.91
CUX2O14529 RNU2-20P-201ENST00000410425 191 ntBASIC3.11□□□□□ -1.91
CUX2O14529 AC109780.2-201ENST00000413467 845 ntBASIC3.11□□□□□ -1.91
CUX2O14529 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.11□□□□□ -1.91
CUX2O14529 UBE2D3P2-201ENST00000424409 445 ntBASIC3.11□□□□□ -1.91
CUX2O14529 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.11□□□□□ -1.91
CUX2O14529 BNIP3P2-201ENST00000441221 577 ntBASIC3.11□□□□□ -1.91
CUX2O14529 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.11□□□□□ -1.91
CUX2O14529 RAC1P7-201ENST00000445367 377 ntBASIC3.11□□□□□ -1.91
CUX2O14529 RPL23AP7-203ENST00000449021 469 ntBASIC3.11□□□□□ -1.91
CUX2O14529 RPL18AP17-201ENST00000455326 198 ntBASIC3.11□□□□□ -1.91
CUX2O14529 ARPC3P2-201ENST00000457786 533 ntBASIC3.11□□□□□ -1.91
CUX2O14529 GTF2IP9-201ENST00000502460 301 ntBASIC3.11□□□□□ -1.91
CUX2O14529 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.11□□□□□ -1.91
CUX2O14529 MTATP6P9-201ENST00000515039 680 ntBASIC3.11□□□□□ -1.91
CUX2O14529 SNORA31.11-201ENST00000516528 139 ntBASIC3.11□□□□□ -1.91
CUX2O14529 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CUX2O14529 OR5AK1P-201ENST00000524837 922 ntBASIC3.11□□□□□ -1.91
CUX2O14529 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.11□□□□□ -1.91
CUX2O14529 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.11□□□□□ -1.91
CUX2O14529 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.11□□□□□ -1.91
CUX2O14529 AL512347.1-201ENST00000566420 503 ntBASIC3.11□□□□□ -1.91
CUX2O14529 MIR502-201ENST00000606349 86 ntBASIC3.11□□□□□ -1.91
CUX2O14529 DUXAP10-204ENST00000612052 616 ntBASIC3.11□□□□□ -1.91
CUX2O14529 AC011890.2-201ENST00000613393 294 ntBASIC3.11□□□□□ -1.91
CUX2O14529 AC025588.4-201ENST00000615802 908 ntBASIC3.11□□□□□ -1.91
CUX2O14529 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.11□□□□□ -1.91
CUX2O14529 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CUX2O14529 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.1□□□□□ -1.91
CUX2O14529 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CUX2O14529 MTATP6P20-201ENST00000414147 562 ntBASIC3.1□□□□□ -1.91
CUX2O14529 AL645638.1-201ENST00000440519 361 ntBASIC3.1□□□□□ -1.91
CUX2O14529 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.1□□□□□ -1.91
CUX2O14529 AC113420.1-201ENST00000507903 571 ntBASIC3.1□□□□□ -1.91
CUX2O14529 MTND4LP22-201ENST00000508209 276 ntBASIC3.1□□□□□ -1.91
CUX2O14529 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.1□□□□□ -1.91
CUX2O14529 AC090615.1-201ENST00000577519 154 ntBASIC3.1□□□□□ -1.91
CUX2O14529 AC015688.2-201ENST00000584523 262 ntBASIC3.1□□□□□ -1.91
CUX2O14529 AC008962.1-201ENST00000605729 304 ntBASIC3.1□□□□□ -1.91
CUX2O14529 AL139022.2-201ENST00000606934 443 ntBASIC3.1□□□□□ -1.91
CUX2O14529 AC099654.9-201ENST00000637055 678 ntBASIC3.1□□□□□ -1.91
CUX2O14529 AC005336.3-201ENST00000623833 2679 ntBASIC3.1□□□□□ -1.91
CUX2O14529 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
CUX2O14529 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.1□□□□□ -1.91
CUX2O14529 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CUX2O14529 RNA5SP160-201ENST00000364866 120 ntBASIC3.09□□□□□ -1.91
CUX2O14529 RNU6-1176P-201ENST00000390955 107 ntBASIC3.09□□□□□ -1.91
CUX2O14529 ARPC3P1-201ENST00000437218 533 ntBASIC3.09□□□□□ -1.91
CUX2O14529 SDCBPP1-201ENST00000440192 890 ntBASIC3.09□□□□□ -1.91
CUX2O14529 RNU6-717P-201ENST00000459076 104 ntBASIC3.09□□□□□ -1.91
CUX2O14529 AC073901.1-201ENST00000462471 408 ntBASIC3.09□□□□□ -1.91
CUX2O14529 HMGN2P13-201ENST00000476476 274 ntBASIC3.09□□□□□ -1.91
CUX2O14529 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.09□□□□□ -1.91
CUX2O14529 AC109464.2-201ENST00000510242 943 ntBASIC3.09□□□□□ -1.91
CUX2O14529 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.09□□□□□ -1.91
CUX2O14529 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.09□□□□□ -1.91
CUX2O14529 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CUX2O14529 AC012443.1-201ENST00000605605 231 ntBASIC3.09□□□□□ -1.91
CUX2O14529 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC3.09□□□□□ -1.91
CUX2O14529 AC109809.1-201ENST00000619665 545 ntBASIC3.09□□□□□ -1.91
CUX2O14529 AC011330.2-201ENST00000621680 635 ntBASIC3.09□□□□□ -1.91
CUX2O14529 AL513185.3-201ENST00000433335 1300 ntBASIC3.09□□□□□ -1.91
CUX2O14529 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CUX2O14529 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC3.09□□□□□ -1.91
CUX2O14529 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CUX2O14529 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.09□□□□□ -1.91
CUX2O14529 RNU6-1155P-201ENST00000363554 107 ntBASIC3.09□□□□□ -1.92
CUX2O14529 RNU4-41P-201ENST00000364426 143 ntBASIC3.09□□□□□ -1.92
CUX2O14529 HMGN2P35-201ENST00000412164 270 ntBASIC3.09□□□□□ -1.92
CUX2O14529 SRIP3-201ENST00000413200 219 ntBASIC3.09□□□□□ -1.92
CUX2O14529 AL592310.1-201ENST00000414330 671 ntBASIC3.09□□□□□ -1.92
CUX2O14529 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CUX2O14529 AL354692.1-201ENST00000423044 315 ntBASIC3.09□□□□□ -1.92
CUX2O14529 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.09□□□□□ -1.92
CUX2O14529 AC234775.1-201ENST00000454247 670 ntBASIC3.09□□□□□ -1.92
CUX2O14529 AC104164.3-201ENST00000467363 1258 ntBASIC3.09□□□□□ -1.92
CUX2O14529 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CUX2O14529 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.09□□□□□ -1.92
CUX2O14529 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.09□□□□□ -1.92
CUX2O14529 AC009314.1-201ENST00000603871 304 ntBASIC3.09□□□□□ -1.92
CUX2O14529 AL645939.4-201ENST00000604495 135 ntBASIC3.09□□□□□ -1.92
CUX2O14529 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.09□□□□□ -1.92
CUX2O14529 AP000553.5-201ENST00000641933 54 ntBASIC3.09□□□□□ -1.92
CUX2O14529 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.08□□□□□ -1.92
CUX2O14529 SNORA7.1-201ENST00000363750 139 ntBASIC3.08□□□□□ -1.92
CUX2O14529 RNU6-925P-201ENST00000384629 104 ntBASIC3.08□□□□□ -1.92
CUX2O14529 MIR135A2-201ENST00000384854 100 ntBASIC3.08□□□□□ -1.92
CUX2O14529 RNU1-101P-201ENST00000391171 127 ntBASIC3.08□□□□□ -1.92
CUX2O14529 AC068533.2-201ENST00000411872 306 ntBASIC3.08□□□□□ -1.92
CUX2O14529 RPS3AP37-201ENST00000419176 745 ntBASIC3.08□□□□□ -1.92
CUX2O14529 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.08□□□□□ -1.92
CUX2O14529 MTCYBP45-201ENST00000435243 565 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms