Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.92□□□□□ -2.26
HMGN4O00479 AC084033.1-201ENST00000550830 633 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 AL391261.3-201ENST00000557194 520 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.92□□□□□ -2.26
HMGN4O00479 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC0.92□□□□□ -2.26
HMGN4O00479 HMGN2P15-201ENST00000585707 270 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 AC010738.1-201ENST00000604970 987 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 AC012360.2-201ENST00000609349 391 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 AC104763.3-201ENST00000613765 618 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 AC018926.3-201ENST00000618841 406 ntBASIC0.92□□□□□ -2.26
HMGN4O00479 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC0.92□□□□□ -2.26
HMGN4O00479 AL049641.1-201ENST00000441055 1948 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 AC007785.2-201ENST00000598627 1916 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
HMGN4O00479 RNU6-53P-201ENST00000365367 106 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 RNU6-882P-201ENST00000391025 103 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 AL356421.1-201ENST00000403255 413 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 SLC44A3-AS1-205ENST00000424505 612 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 AL035410.1-201ENST00000427409 427 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC0.91□□□□□ -2.26
HMGN4O00479 DDX3P2-201ENST00000446138 111 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 AF213884.2-201ENST00000510417 903 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.91□□□□□ -2.26
HMGN4O00479 AP005660.1-201ENST00000522972 293 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 HAUS1P3-201ENST00000523909 662 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.91□□□□□ -2.26
HMGN4O00479 EMP1-206ENST00000537612 505 ntTSL 3 BASIC0.91□□□□□ -2.26
HMGN4O00479 MIR4713-201ENST00000582691 75 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 AC105224.1-201ENST00000587055 421 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 BNIP3P25-201ENST00000596023 559 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 AC080078.3-201ENST00000605407 463 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 AL137246.1-201ENST00000607072 977 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 AC069294.1-201ENST00000608397 350 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 AC090132.2-201ENST00000615881 347 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 AC068722.2-201ENST00000618734 544 ntBASIC0.91□□□□□ -2.26
HMGN4O00479 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
HMGN4O00479 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.9□□□□□ -2.27
HMGN4O00479 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
HMGN4O00479 RNU6-1155P-201ENST00000363554 107 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 RNU1-57P-201ENST00000384491 166 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 MIR325-201ENST00000385260 98 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 RNA5SP212-201ENST00000391223 107 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGN4O00479 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGN4O00479 AL592447.1-201ENST00000447592 540 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGN4O00479 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGN4O00479 SNRPFP4-201ENST00000456366 242 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 HMGB1P36-201ENST00000487709 576 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 AC114801.2-201ENST00000503825 781 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGN4O00479 RNA5SP165-201ENST00000517142 115 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGN4O00479 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.9□□□□□ -2.27
HMGN4O00479 AC022254.1-201ENST00000567857 235 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 AC012435.1-202ENST00000568772 240 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 MIR3198-2-201ENST00000577868 80 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.9□□□□□ -2.27
HMGN4O00479 MIR4298-201ENST00000584380 73 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 AC016925.2-201ENST00000605108 242 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 AC004775.1-201ENST00000607389 753 ntBASIC0.9□□□□□ -2.27
HMGN4O00479 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC0.9□□□□□ -2.27
HMGN4O00479 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.9□□□□□ -2.27
HMGN4O00479 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
HMGN4O00479 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HMGN4O00479 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
HMGN4O00479 RNU6-748P-201ENST00000384648 107 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 RNU6-750P-201ENST00000390946 107 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.89□□□□□ -2.27
HMGN4O00479 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.89□□□□□ -2.27
HMGN4O00479 Z82205.1-201ENST00000428456 297 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC0.89□□□□□ -2.27
HMGN4O00479 AL022238.1-201ENST00000442557 355 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 MTND6P13-201ENST00000443510 523 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 RAC1P7-201ENST00000445367 377 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 MRPS17P3-201ENST00000465453 385 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.89□□□□□ -2.27
HMGN4O00479 AC093752.1-206ENST00000511823 336 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 AC107953.1-201ENST00000522216 297 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.89□□□□□ -2.27
HMGN4O00479 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.89□□□□□ -2.27
HMGN4O00479 AP001269.3-201ENST00000588718 329 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 PRR13P7-201ENST00000605538 430 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 AC008498.1-201ENST00000613012 531 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC0.89□□□□□ -2.27
HMGN4O00479 U6.107-201ENST00000637108 79 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 ZNF663P-202ENST00000641770 1131 ntBASIC0.89□□□□□ -2.27
HMGN4O00479 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
HMGN4O00479 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC0.88□□□□□ -2.27
HMGN4O00479 Y_RNA.327-201ENST00000365201 102 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
HMGN4O00479 RNU6-444P-201ENST00000383988 108 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 RNU2-49P-201ENST00000410666 184 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGN4O00479 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC0.88□□□□□ -2.27
HMGN4O00479 RPL30P13-201ENST00000418873 348 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 FO393419.3-201ENST00000428741 282 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 RPL30P4-201ENST00000429309 333 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 AL592045.1-201ENST00000429867 352 ntBASIC0.88□□□□□ -2.27
HMGN4O00479 AL365400.1-201ENST00000431854 640 ntBASIC0.88□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms