Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AL445646.1-201ENST00000431784 216 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 IFNA11P-201ENST00000446352 526 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.89□□□□□ -2.11
UPK1AO00322 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC1.89□□□□□ -2.11
UPK1AO00322 AC107626.1-201ENST00000471084 183 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 HMGB1P36-201ENST00000487709 576 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 AC108729.1-201ENST00000487812 947 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 RPS15AP36-201ENST00000492022 382 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
UPK1AO00322 AC010486.1-201ENST00000511793 424 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.89□□□□□ -2.11
UPK1AO00322 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC1.89□□□□□ -2.11
UPK1AO00322 ZKSCAN7P1-201ENST00000543668 673 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.89□□□□□ -2.11
UPK1AO00322 OR11H5P-201ENST00000554039 926 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.89□□□□□ -2.11
UPK1AO00322 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.89□□□□□ -2.11
UPK1AO00322 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.89□□□□□ -2.11
UPK1AO00322 RPS15AP11-201ENST00000594193 385 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 AC006270.3-201ENST00000605967 1036 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 AC090186.1-201ENST00000605991 572 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 AC103710.1-201ENST00000610003 901 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 Y_RNA.783-201ENST00000613546 102 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 AC004520.1-201ENST00000608362 1413 ntBASIC1.89□□□□□ -2.11
UPK1AO00322 AL359851.1-201ENST00000569460 4997 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 MTND4P27-201ENST00000450813 1354 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 DDX43P2-201ENST00000604753 1354 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 Y_RNA.245-201ENST00000364493 95 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 Y_RNA.472-201ENST00000384322 102 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 MIR23A-201ENST00000385245 73 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 CCNG1P1-201ENST00000406783 885 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.88□□□□□ -2.11
UPK1AO00322 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 USP9YP33-201ENST00000412220 421 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.88□□□□□ -2.11
UPK1AO00322 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK1AO00322 Z98742.2-201ENST00000431564 187 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.88□□□□□ -2.11
UPK1AO00322 USP9YP35-201ENST00000435696 412 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 SNRPEP9-201ENST00000436794 238 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.88□□□□□ -2.11
UPK1AO00322 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC1.88□□□□□ -2.11
UPK1AO00322 AC233279.1-201ENST00000455300 423 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 RPL37P6-201ENST00000460682 294 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.88□□□□□ -2.11
UPK1AO00322 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
UPK1AO00322 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.88□□□□□ -2.11
UPK1AO00322 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC1.88□□□□□ -2.11
UPK1AO00322 AC109445.1-201ENST00000512356 383 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK1AO00322 AC110760.3-202ENST00000515177 371 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 RNA5SP364-201ENST00000516938 78 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.88□□□□□ -2.11
UPK1AO00322 NACAP3-201ENST00000552100 481 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 AC091544.4-201ENST00000555268 342 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK1AO00322 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.88□□□□□ -2.11
UPK1AO00322 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK1AO00322 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.88□□□□□ -2.11
UPK1AO00322 AC092574.1-201ENST00000609771 420 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 AC245884.12-201ENST00000615364 59 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 HMGB1P24-202ENST00000615653 685 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 AC109809.1-201ENST00000619665 545 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 AC106858.1-201ENST00000637497 429 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
UPK1AO00322 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
UPK1AO00322 AC010329.5-201ENST00000623497 2174 ntBASIC1.88□□□□□ -2.11
UPK1AO00322 AC080128.1-201ENST00000474389 1917 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UPK1AO00322 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.87□□□□□ -2.11
UPK1AO00322 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
UPK1AO00322 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
UPK1AO00322 RSL24D1P4-201ENST00000400938 484 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AL355497.1-201ENST00000406262 551 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 RNU2-2P-201ENST00000410396 191 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 HMGB1P9-201ENST00000429856 646 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 UBE2D3P1-201ENST00000436669 444 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 MTCO3P45-201ENST00000443036 613 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.87□□□□□ -2.11
UPK1AO00322 COX6CP12-201ENST00000446748 202 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 ZNF886P-201ENST00000450781 723 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AC008481.1-201ENST00000463278 396 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 RPS27P21-201ENST00000486977 252 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 RN7SL274P-201ENST00000492268 272 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 ANXA2P1-201ENST00000505539 926 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AC098591.2-201ENST00000510152 315 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 MTND5P13-201ENST00000513046 1079 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AC091163.3-201ENST00000518269 1144 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 BTF3P12-201ENST00000519620 469 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AL359212.1-201ENST00000556608 614 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.87□□□□□ -2.11
UPK1AO00322 AC009712.1-201ENST00000564938 316 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AC009127.3-201ENST00000570531 403 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 MIR5089-201ENST00000580047 84 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AC060771.1-201ENST00000582031 164 ntBASIC1.87□□□□□ -2.11
UPK1AO00322 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.87□□□□□ -2.11
UPK1AO00322 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.87□□□□□ -2.11
UPK1AO00322 AP000403.1-201ENST00000603349 851 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms