Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC099548.1-201ENST00000421443 426 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 Z82209.1-201ENST00000422141 2135 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AC092047.1-201ENST00000424997 240 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AL353777.1-201ENST00000425552 326 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
PDLIM1O00151 AL139132.1-201ENST00000431587 344 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 BNIP3P2-201ENST00000441221 577 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 MTATP6P30-201ENST00000443540 664 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.61□□□□□ -1.99
PDLIM1O00151 AC020550.1-201ENST00000447385 163 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.61□□□□□ -1.99
PDLIM1O00151 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.61□□□□□ -1.99
PDLIM1O00151 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.61□□□□□ -1.99
PDLIM1O00151 AP000797.1-201ENST00000478870 387 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AL160314.1-201ENST00000490836 438 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.61□□□□□ -1.99
PDLIM1O00151 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.61□□□□□ -1.99
PDLIM1O00151 AC022616.6-201ENST00000520479 119 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AC106038.2-201ENST00000520706 568 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AC100870.1-201ENST00000522035 505 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.61□□□□□ -1.99
PDLIM1O00151 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.61□□□□□ -1.99
PDLIM1O00151 ZNF519P3-201ENST00000557158 1032 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AC109446.2-201ENST00000567872 497 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AL645944.1-201ENST00000603857 493 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AL161729.4-201ENST00000604650 476 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC2.61□□□□□ -1.99
PDLIM1O00151 AC068057.2-201ENST00000624047 895 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 AC135776.4-201ENST00000624300 1904 ntBASIC2.61□□□□□ -1.99
PDLIM1O00151 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PDLIM1O00151 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
PDLIM1O00151 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PDLIM1O00151 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
PDLIM1O00151 AC096644.4-201ENST00000563417 2912 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
PDLIM1O00151 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 SNORA9.2-201ENST00000365361 133 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PDLIM1O00151 AL359634.1-202ENST00000404721 284 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 FCF1P10-201ENST00000407590 479 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 RNU2-33P-201ENST00000410344 192 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.6□□□□□ -1.99
PDLIM1O00151 Z92545.1-201ENST00000411782 234 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 RPL17P12-201ENST00000413391 526 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 AC107081.1-201ENST00000414975 361 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 AC006366.1-201ENST00000422002 759 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.6□□□□□ -1.99
PDLIM1O00151 AC092447.3-201ENST00000426027 686 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC2.6□□□□□ -1.99
PDLIM1O00151 UBE2D3P4-201ENST00000441973 436 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC2.6□□□□□ -1.99
PDLIM1O00151 AC011753.1-201ENST00000451001 220 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.6□□□□□ -1.99
PDLIM1O00151 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.6□□□□□ -1.99
PDLIM1O00151 AC079804.2-201ENST00000490376 200 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 AC080014.1-201ENST00000496877 1201 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.6□□□□□ -1.99
PDLIM1O00151 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.6□□□□□ -1.99
PDLIM1O00151 AC068135.2-201ENST00000569293 1028 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 MIR5697-201ENST00000578045 78 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 MIR3915-201ENST00000578518 97 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 MIR4293-201ENST00000584305 78 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.6□□□□□ -1.99
PDLIM1O00151 AL359999.1-201ENST00000604513 294 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 AC108747.1-201ENST00000609508 535 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 AC135507.2-201ENST00000612443 309 ntBASIC2.6□□□□□ -1.99
PDLIM1O00151 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
PDLIM1O00151 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.6□□□□□ -1.99
PDLIM1O00151 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.59□□□□□ -1.99
PDLIM1O00151 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
PDLIM1O00151 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
PDLIM1O00151 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.59□□□□□ -1.99
PDLIM1O00151 RNU6-1284P-201ENST00000363701 100 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 RNY4P16-201ENST00000364768 94 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 RNU5E-5P-201ENST00000365379 116 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 RNU6-140P-201ENST00000384566 108 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 AF274854.1-201ENST00000413236 615 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 USP9YP13-201ENST00000417797 480 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 RPS15AP12-201ENST00000419498 388 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 MTND2P18-201ENST00000419962 1030 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 ZNF863P-201ENST00000426746 417 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.59□□□□□ -1.99
PDLIM1O00151 FCF1P1-201ENST00000432690 571 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 COX6CP12-201ENST00000446748 202 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.59□□□□□ -1.99
PDLIM1O00151 USP9YP12-201ENST00000450481 570 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 AC098826.2-201ENST00000452011 651 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 SSXP1-201ENST00000453640 473 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 RPL37P6-201ENST00000460682 294 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 MTCO2P6-201ENST00000463134 685 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 RPS29P26-201ENST00000477483 171 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.59□□□□□ -1.99
PDLIM1O00151 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.59□□□□□ -1.99
PDLIM1O00151 AC090096.1-201ENST00000489168 390 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 RPS27P26-201ENST00000494583 239 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 AC083906.5-201ENST00000503722 328 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 RNU6-927P-201ENST00000516199 100 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 RNA5SP290-201ENST00000517133 127 ntBASIC2.59□□□□□ -1.99
PDLIM1O00151 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms