Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 Z99497.1-201ENST00000421282 135 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 MTCO2P34-201ENST00000421994 607 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AL049734.2-201ENST00000441066 616 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 SNORD121B-201ENST00000458838 81 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 snoU109.4-201ENST00000458953 143 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 RPL30P14-201ENST00000482744 348 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AIG1P1-201ENST00000503376 148 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 VN1R104P-201ENST00000505115 1009 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AC105313.1-201ENST00000509121 353 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 SNORA31.11-201ENST00000516528 139 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 SNORA31.22-201ENST00000517204 135 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 ELOCP29-201ENST00000588193 334 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 NUTF2P8-201ENST00000604593 363 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AL158211.4-201ENST00000606988 584 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AC010678.1-201ENST00000614118 713 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 SNHG22-203ENST00000617833 660 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AL603758.1-201ENST00000618654 241 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 AL159972.1-201ENST00000625150 448 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 FO624990.1-201ENST00000636373 85 ntBASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
TRIM49D1C9J1S8 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 RNY3P10-201ENST00000384764 102 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 MIR34A-201ENST00000385130 110 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 RNU6-882P-201ENST00000391025 103 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 MIR1305-201ENST00000408300 86 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC093106.2-201ENST00000428212 385 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 USP9YP14-201ENST00000430663 563 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 FCF1P1-201ENST00000432690 571 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 RPL26P6-201ENST00000440913 438 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 UBBP3-201ENST00000445497 241 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC009901.1-201ENST00000506703 541 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 FABP5P5-201ENST00000515537 406 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC022616.6-201ENST00000520479 119 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 SNRPGP16-201ENST00000533275 226 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 FAM60BP-201ENST00000578364 658 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 MIR4446-201ENST00000578505 67 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC009977.1-201ENST00000586015 570 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 GLUD1P4-201ENST00000590914 418 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC020895.1-201ENST00000595362 272 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 RPL23AP78-201ENST00000599928 470 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC146944.4-201ENST00000602697 718 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AL031176.1-201ENST00000604554 466 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AP000860.1-201ENST00000605250 559 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC092140.2-201ENST00000618027 521 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 U4.3-201ENST00000621047 82 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC091953.2-201ENST00000623979 160 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC025048.6-202ENST00000627667 438 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 AC011460.1-201ENST00000636268 1834 ntBASIC2.39□□□□□ -2.03
TRIM49D1C9J1S8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 MTND4P4-201ENST00000439033 1366 ntBASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 Y_RNA.77-201ENST00000362962 107 ntBASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 RNU4-1-201ENST00000363925 141 ntBASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 SNORD56.5-201ENST00000364281 72 ntBASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 MIR518C-201ENST00000384822 101 ntBASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 AF274854.1-201ENST00000413236 615 ntBASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 AC019097.1-201ENST00000424783 735 ntBASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 AL589872.1-201ENST00000426602 288 ntBASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 RPL31P3-201ENST00000458430 332 ntBASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 AC104563.1-201ENST00000476147 376 ntBASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 MTND1P3-201ENST00000484956 952 ntBASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 RPL36AP51-201ENST00000487216 318 ntBASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.38□□□□□ -2.03
TRIM49D1C9J1S8 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms