Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-884P-201ENST00000363889 107 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 RPL23AP29-201ENST00000397284 453 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 TPMTP3-201ENST00000411928 735 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 SNORD56-201ENST00000413522 71 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 TAF13P2-201ENST00000416876 286 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AIMP1P2-201ENST00000425294 312 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AC008850.1-201ENST00000427546 362 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 RPL30P4-201ENST00000429309 333 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AC004383.1-201ENST00000438135 289 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 FTH1P25-201ENST00000447665 469 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 MTND2P24-201ENST00000453434 806 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 RPL23AP3-201ENST00000453844 468 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 ATG12P2-201ENST00000456830 416 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 MTCO1P42-201ENST00000457379 726 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 SNORD121B-201ENST00000458838 81 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 BZW1P2-201ENST00000473537 826 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AC069528.1-202ENST00000482888 637 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AC117522.2-201ENST00000510049 657 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 MRPS17P9-201ENST00000511924 393 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-237P-201ENST00000515985 71 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-295P-201ENST00000516901 104 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AC084851.1-201ENST00000529105 249 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 MIR4287-201ENST00000579398 78 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AC078899.2-201ENST00000595282 212 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 AC104763.2-201ENST00000604179 382 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-482P-201ENST00000391068 107 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 MCTS2P-201ENST00000394552 546 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AL512604.1-201ENST00000404812 257 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 RNA5SP270-201ENST00000411361 118 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 NDUFS5P4-201ENST00000412983 318 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 MTATP6P27-201ENST00000416987 621 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC007435.1-201ENST00000421086 415 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 MTCYBP32-201ENST00000427945 1084 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 RPL12P25-201ENST00000455592 494 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC104564.1-201ENST00000493028 407 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 RPS27AP10-201ENST00000496103 208 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC026801.1-201ENST00000497178 464 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC010468.3-201ENST00000508225 458 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AF213884.2-201ENST00000510417 903 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-1102P-201ENST00000516149 96 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 SNORD19.2-201ENST00000516978 73 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-1261P-201ENST00000517194 104 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC022784.5-201ENST00000522241 437 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC005951.2-201ENST00000576282 495 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 MIR4637-201ENST00000582405 84 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC007229.1-201ENST00000590455 412 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC239868.4-201ENST00000608318 671 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC010975.3-201ENST00000618727 978 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC087821.2-201ENST00000637086 450 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 AC008555.8-201ENST00000623602 2168 ntBASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV3A0A0B4J244 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 MTND5P30-201ENST00000452896 1731 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 RNU6-778P-201ENST00000363269 103 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 Z98749.2-208ENST00000381646 500 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 Y_RNA.548-201ENST00000384656 105 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 U8.13-201ENST00000390842 128 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 SNORA26.9-201ENST00000391322 122 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 RN7SKP101-201ENST00000411376 320 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AL591806.2-201ENST00000433122 173 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AL512661.1-201ENST00000434586 1253 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 RPL39P6-201ENST00000448289 150 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AL500527.1-201ENST00000448532 255 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 RPL7P55-201ENST00000450522 746 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC112518.2-201ENST00000508565 425 ntBASIC1.3□□□□□ -2.2
TRAV3A0A0B4J244 AC116337.1-201ENST00000509680 687 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms