Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AC096649.2-201ENST00000416186 393 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 ZNF90P2-204ENST00000419323 1075 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AL451054.2-201ENST00000420896 202 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 BPY2DP-201ENST00000422208 265 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AL356320.1-201ENST00000429616 163 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 ARPC3P5-201ENST00000448802 534 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 DYNLL1P5-201ENST00000467158 270 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 SNORA31.6-201ENST00000516241 130 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 IGKV3-31-201ENST00000523109 329 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 CYCSP26-201ENST00000534107 320 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AL359212.1-201ENST00000556608 614 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 MIR5089-201ENST00000580047 84 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AL096840.1-201ENST00000603287 93 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AL139344.1-201ENST00000605228 195 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AC069545.1-201ENST00000605671 358 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AC099785.1-201ENST00000605697 437 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AL021997.1-201ENST00000605757 193 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AL138478.1-201ENST00000612252 832 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AC008759.3-201ENST00000613300 508 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AL161423.1-201ENST00000613700 262 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AL445264.1-201ENST00000621719 171 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 AC068880.4-201ENST00000623082 495 ntBASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USH1CQ9Y6N9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 RNU6-359P-201ENST00000365466 108 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 RNU1-73P-201ENST00000383971 164 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 RNU6-1207P-201ENST00000384343 107 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 SNORA3.2-201ENST00000408221 125 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 USP9YP19-201ENST00000412165 485 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 USP9YP13-201ENST00000417797 480 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AC007435.1-201ENST00000421086 415 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 MRPS36P1-201ENST00000421291 307 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AL121890.1-201ENST00000435457 205 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 PTGES3P1-201ENST00000439531 483 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 KLF3P2-201ENST00000465138 268 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 RNU7-193P-201ENST00000516723 65 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AP003355.1-201ENST00000518956 587 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AC023825.1-201ENST00000566704 1030 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AC008121.1-201ENST00000603244 268 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AL357094.1-201ENST00000603845 844 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AC007349.4-201ENST00000608114 532 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AC107214.2-201ENST00000608204 634 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AL589743.7-201ENST00000612637 233 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 MIR6715A-201ENST00000615929 79 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 MIR6873-201ENST00000622788 63 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AL356266.1-201ENST00000623311 483 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AC091932.3-201ENST00000624223 323 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AC019226.1-201ENST00000625666 515 ntBASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.93□□□□□ -2.1
USH1CQ9Y6N9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 TXNP7-201ENST00000406296 293 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 RNU6-516P-201ENST00000411381 104 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 Z98742.3-201ENST00000418637 326 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 HMGN1P5-201ENST00000448591 263 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 AL353705.4-201ENST00000449661 238 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 PSPHP1-201ENST00000450062 261 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 AL160314.1-201ENST00000490836 438 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 RPS27AP10-201ENST00000496103 208 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 YWHAEP4-201ENST00000505390 198 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 AC008628.1-201ENST00000508663 265 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 AC006499.2-201ENST00000513470 337 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 MTCO3P27-201ENST00000514397 196 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 RNU1-41P-201ENST00000516161 162 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 RNU1-48P-201ENST00000516400 162 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 SCARNA3-201ENST00000517097 143 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 RNA5SP290-201ENST00000517133 127 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 DEFB130C-202ENST00000530001 230 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms