Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 MIR4293-201ENST00000584305 78 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC012065.4-201ENST00000602445 679 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AL031775.1-201ENST00000607014 887 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC108747.1-201ENST00000609508 535 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC131902.3-201ENST00000611767 581 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC008498.1-201ENST00000613012 531 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AL136313.1-201ENST00000624804 202 ntBASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHGA1Q9Y5H4 AL359693.1-201ENST00000614959 2407 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 CR848007.1-201ENST00000442354 1699 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 RNA5SP383-201ENST00000362934 120 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 Y_RNA.245-201ENST00000364493 95 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 MT-TH-201ENST00000387441 69 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AL513477.1-202ENST00000417061 214 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 RPL7P37-201ENST00000425095 738 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC098614.2-201ENST00000426040 255 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 SNORA64.4-201ENST00000516632 81 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 RNA5SP290-201ENST00000517133 127 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC022616.6-201ENST00000520479 119 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC104027.1-201ENST00000521887 300 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 MIR4319-201ENST00000577285 85 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC138761.3-201ENST00000579993 334 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 MIR4435-1-201ENST00000582552 80 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AP001981.2-201ENST00000603241 418 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC121247.2-201ENST00000604776 136 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 ATP1B3P1-201ENST00000605365 821 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC121334.2-201ENST00000605387 271 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC138749.5-201ENST00000611461 208 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC116165.2-201ENST00000616705 206 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC092140.2-201ENST00000618027 521 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 UCA1.1-201ENST00000620952 75 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC009878.1-201ENST00000621819 340 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC010149.2-201ENST00000637608 315 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC096644.4-201ENST00000563417 2912 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC026241.1-201ENST00000517873 2142 ntBASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHGA1Q9Y5H4 AC062016.1-201ENST00000355719 319 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 RNU4-21P-201ENST00000362802 126 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 U8.9-201ENST00000365667 134 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 SNORA26.7-201ENST00000391288 122 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 MIR887-201ENST00000401258 79 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AL359634.1-202ENST00000404721 284 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 RNU2-62P-201ENST00000410868 191 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 OOSP1P1-201ENST00000423265 274 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 CYCSP46-201ENST00000423569 204 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AL356583.2-201ENST00000426536 280 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AC063976.3-201ENST00000426849 329 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 HMGB1P9-201ENST00000429856 646 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 ISCA1P2-201ENST00000438679 421 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 RN7SL432P-201ENST00000484057 298 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 RN7SL283P-201ENST00000489055 303 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AC026801.1-201ENST00000497178 464 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 HIGD1AP13-201ENST00000509878 289 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 FABP5P5-201ENST00000515537 406 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 RN7SKP258-201ENST00000517151 304 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AC107934.1-201ENST00000522215 217 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 MTND2P38-201ENST00000522536 667 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AL391261.3-201ENST00000557194 520 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 MIR3118-1-201ENST00000581787 76 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 NRBF2P5-201ENST00000603087 788 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 Z99497.2-201ENST00000603634 310 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AL359999.1-201ENST00000604513 294 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms