Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC004972.1-201ENST00000623934 2209 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 RNU6-451P-201ENST00000362921 107 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 SNORA73.2-201ENST00000364946 201 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 SNORD115-7-201ENST00000365306 82 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 Y_RNA.576-201ENST00000384781 102 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 RNU6-328P-201ENST00000390887 106 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 SNORD37.1-201ENST00000390968 65 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 AL354719.1-201ENST00000406535 843 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC091286.1-201ENST00000431233 461 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 MTCO3P18-201ENST00000440206 761 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 AL162395.1-201ENST00000457882 422 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 RPL7L1P8-201ENST00000469911 741 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 FCF1P3-201ENST00000496394 590 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC110768.1-201ENST00000509222 400 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 SNORA31.3-201ENST00000516029 96 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 RNU6-927P-201ENST00000516199 100 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 RNU6-1256P-201ENST00000516539 103 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 RN7SKP219-201ENST00000516825 296 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 RANP3-201ENST00000530970 276 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 OR5B10P-201ENST00000532869 642 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 MIR3158-1-201ENST00000583596 81 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 BNIP3P30-201ENST00000601184 574 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC245389.1-201ENST00000605141 529 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 DISC2.1-201ENST00000612827 205 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC012409.4-201ENST00000612923 249 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC006133.1-201ENST00000617106 264 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 U6.98-201ENST00000637157 84 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PKP3Q9Y446 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PKP3Q9Y446 AC093908.1-201ENST00000623125 8092 ntBASIC3.46□□□□□ -1.86
PKP3Q9Y446 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PKP3Q9Y446 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PKP3Q9Y446 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
PKP3Q9Y446 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PKP3Q9Y446 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PKP3Q9Y446 AC032011.1-201ENST00000611703 1549 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PKP3Q9Y446 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 NACAP2-201ENST00000318548 624 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 RNU6-1287P-201ENST00000362914 107 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PKP3Q9Y446 DEFB109C-201ENST00000382575 264 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 DEFB109B-201ENST00000382656 264 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 RNU6-1060P-201ENST00000384664 107 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 RNU2-29P-201ENST00000410423 189 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 RNU6-1068P-201ENST00000410958 103 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 OR9R1P-201ENST00000412200 877 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 AL159169.1-201ENST00000421119 127 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 AL139413.1-201ENST00000421309 217 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 NDUFB4P7-201ENST00000423198 363 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 CALM2P2-201ENST00000428512 440 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 AL590383.1-201ENST00000428602 75 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 HMGN2P31-201ENST00000432430 273 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 MTATP6P23-201ENST00000440153 476 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 RBMY2UP-201ENST00000453474 324 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 RPL31P60-201ENST00000478450 367 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 RPS4XP13-201ENST00000483219 789 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 AP002812.1-201ENST00000495378 474 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 AC092436.1-201ENST00000506450 503 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 AC104806.1-201ENST00000508720 308 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 FCF1P8-201ENST00000510322 597 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 ADI1P3-201ENST00000549509 470 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 HIF1AP1-201ENST00000553642 175 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 TGIF1P1-201ENST00000558095 802 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 MIR548S-201ENST00000581352 82 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 AL158032.1-201ENST00000605401 106 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 AC008945.2-201ENST00000606056 604 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.45□□□□□ -1.86
PKP3Q9Y446 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.45□□□□□ -1.86
PKP3Q9Y446 MTND5P42-201ENST00000637720 498 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms