Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 OR5BM1P-201ENST00000512021 366 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 RNU6-678P-201ENST00000516832 109 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC123904.3-201ENST00000547218 814 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 ZNF861P-201ENST00000588126 639 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AL161734.1-201ENST00000609720 557 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC034102.8-201ENST00000615146 484 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC073308.1-201ENST00000623696 305 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 ASNSP3-201ENST00000451989 1306 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 MIR181A2-201ENST00000384863 110 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AF228730.1-201ENST00000397972 663 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 RNU2-33P-201ENST00000410344 192 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AC078974.1-201ENST00000411597 223 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 USP9YP26-201ENST00000421008 661 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AL593851.1-201ENST00000426171 157 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 USP12PX-201ENST00000432383 1057 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AL049734.2-201ENST00000441066 616 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 MTATP6P30-201ENST00000443540 664 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 DDX3P2-201ENST00000446138 111 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AC004263.1-201ENST00000479327 332 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AC008716.1-201ENST00000511084 513 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 RNA5SP148-201ENST00000516527 94 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 RNA5SP291-201ENST00000517222 105 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AC007115.1-201ENST00000546853 234 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AL512310.1-201ENST00000548639 172 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AC002400.1-201ENST00000569310 726 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AL161729.4-201ENST00000604650 476 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AC090115.4-201ENST00000609970 188 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.78□□□□□ -1.96
HPS4Q9NQG7 AC092608.2-201ENST00000624427 218 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.78□□□□□ -1.96
HPS4Q9NQG7 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HPS4Q9NQG7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
HPS4Q9NQG7 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HPS4Q9NQG7 Y_RNA.97-201ENST00000363094 102 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 RNU6-217P-201ENST00000384164 104 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 SNORA67.4-201ENST00000384688 142 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 U8.14-201ENST00000390843 143 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 AL139039.1-201ENST00000401900 692 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HPS4Q9NQG7 AC011233.1-201ENST00000422812 283 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 RPL7P34-201ENST00000433316 712 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 ARPC3P1-201ENST00000437218 533 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 AC005094.1-201ENST00000440420 368 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 MTCO1P42-201ENST00000457379 726 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 AC128713.1-201ENST00000471495 306 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 RPL9P33-201ENST00000484311 566 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.77□□□□□ -1.97
HPS4Q9NQG7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
HPS4Q9NQG7 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.77□□□□□ -1.97
HPS4Q9NQG7 AC096725.1-201ENST00000514266 313 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.77□□□□□ -1.97
HPS4Q9NQG7 AL136363.1-201ENST00000605349 337 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.77□□□□□ -1.97
HPS4Q9NQG7 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.77□□□□□ -1.97
HPS4Q9NQG7 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
HPS4Q9NQG7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 AC010338.1-201ENST00000621823 717 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 AC019226.2-201ENST00000625973 424 ntBASIC2.77□□□□□ -1.97
HPS4Q9NQG7 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.77□□□□□ -1.97
HPS4Q9NQG7 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.76□□□□□ -1.97
HPS4Q9NQG7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HPS4Q9NQG7 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HPS4Q9NQG7 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.76□□□□□ -1.97
HPS4Q9NQG7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
HPS4Q9NQG7 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.76□□□□□ -1.97
HPS4Q9NQG7 RNY4P24-201ENST00000362735 96 ntBASIC2.76□□□□□ -1.97
HPS4Q9NQG7 RNU6-278P-201ENST00000390945 109 ntBASIC2.76□□□□□ -1.97
HPS4Q9NQG7 AL139095.1-201ENST00000404326 391 ntBASIC2.76□□□□□ -1.97
HPS4Q9NQG7 AL513475.1-201ENST00000406602 315 ntBASIC2.76□□□□□ -1.97
HPS4Q9NQG7 RNA5SP508-201ENST00000411327 119 ntBASIC2.76□□□□□ -1.97
HPS4Q9NQG7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC2.76□□□□□ -1.97
HPS4Q9NQG7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.76□□□□□ -1.97
HPS4Q9NQG7 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.76□□□□□ -1.97
HPS4Q9NQG7 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.76□□□□□ -1.97
HPS4Q9NQG7 SUMO1P4-201ENST00000429430 302 ntBASIC2.76□□□□□ -1.97
HPS4Q9NQG7 RPL37P21-201ENST00000435890 276 ntBASIC2.76□□□□□ -1.97
HPS4Q9NQG7 MTCYBP39-201ENST00000437562 491 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms