Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 NANOGP2-201ENST00000435391 727 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AC018634.1-201ENST00000437554 401 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AC016691.1-201ENST00000441321 413 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 HMGN1P5-201ENST00000448591 263 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 RNU2-19P-201ENST00000517288 84 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 FAM92A1P1-201ENST00000528023 890 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AC118273.2-201ENST00000532092 465 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AL121821.2-201ENST00000556081 394 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 MTND3P13-201ENST00000574391 343 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 VN1R83P-201ENST00000595685 445 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AC073544.2-201ENST00000601155 540 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AL138963.2-201ENST00000605137 226 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AC068276.1-201ENST00000605793 379 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AC084824.5-201ENST00000612009 413 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 DUSP12P1-201ENST00000612874 516 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 uc_338.14-201ENST00000613162 166 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 AC009233.1-201ENST00000616477 371 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 SDR42E1P4-201ENST00000620894 481 ntBASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC1.9□□□□□ -2.11
VCX3AQ9NNX9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 RNU6-486P-201ENST00000363116 107 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 RNU6-658P-201ENST00000384606 106 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 MIR221-201ENST00000385135 110 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 RPS4XP8-201ENST00000402039 771 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AC244035.1-201ENST00000430042 390 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 MEMO1P3-201ENST00000459811 302 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AC103987.1-201ENST00000473394 348 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AC096576.1-201ENST00000489014 359 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AL358832.1-201ENST00000497800 389 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AC093281.2-201ENST00000510153 597 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 SNORA25.11-201ENST00000515935 105 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 MIR4700-201ENST00000578311 74 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AC025165.5-201ENST00000602802 578 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 RPL21P136-201ENST00000605378 396 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AC024060.1-201ENST00000607052 494 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AL109620.1-201ENST00000618738 1197 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AP000943.4-201ENST00000622912 357 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 AC126544.2-201ENST00000625174 749 ntBASIC1.89□□□□□ -2.11
VCX3AQ9NNX9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 RNVU1-14-201ENST00000384770 164 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 MIR34A-201ENST00000385130 110 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 MIR147B-201ENST00000390185 80 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 RPS20P15-201ENST00000412792 311 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AL953862.1-201ENST00000423016 168 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 RPL36AP53-201ENST00000432891 316 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 RSL24D1P3-201ENST00000449255 495 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AL118520.1-201ENST00000450770 291 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AC139453.3-201ENST00000493276 369 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AC024589.1-201ENST00000512207 263 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 MTND2P31-201ENST00000512602 616 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 SMURF2P1-201ENST00000514992 481 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AC024614.2-201ENST00000577584 372 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AC060771.1-201ENST00000582031 164 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 ELOCP29-201ENST00000588193 334 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AC093673.2-201ENST00000609674 331 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AC046143.2-201ENST00000609789 160 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AC009487.4-201ENST00000624969 3585 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 AL390862.1-201ENST00000635467 1469 ntBASIC1.88□□□□□ -2.11
VCX3AQ9NNX9 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 RNU6-512P-201ENST00000364438 103 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 RNU6-19P-201ENST00000384718 107 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms