Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 OSBPL9P5-201ENST00000542581 171 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AL133153.1-201ENST00000557756 303 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AP000254.1-201ENST00000609934 520 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 TUG1_2.1-201ENST00000614234 87 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AF246928.1-201ENST00000623768 87 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AC112204.3-201ENST00000623822 332 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 AC097655.1-201ENST00000635075 318 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 PABPC1P9-201ENST00000426076 1612 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.77□□□□□ -1.97
RNF41Q9H4P4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.77□□□□□ -1.97
RNF41Q9H4P4 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC090740.1-201ENST00000623193 2262 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 RNA5SP289-201ENST00000362332 137 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 RNY4P24-201ENST00000362735 96 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 SNORA23-201ENST00000365128 182 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 XGY1-201ENST00000381172 446 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 RPS4XP7-201ENST00000406274 780 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 NDUFB4P7-201ENST00000423198 363 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 SNRPEP4-201ENST00000435815 279 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AL592447.1-201ENST00000447592 540 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 ARL4AP2-201ENST00000507378 601 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC118465.1-201ENST00000513820 1271 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 RNU6-56P-201ENST00000516986 93 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AP003467.2-201ENST00000520175 319 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC005951.2-201ENST00000576282 495 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 MIR4435-1-201ENST00000582552 80 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AP002826.1-201ENST00000608835 315 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC009570.1-201ENST00000609599 745 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC007494.3-201ENST00000624660 743 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 AC005832.2-201ENST00000538921 1430 ntBASIC2.76□□□□□ -1.97
RNF41Q9H4P4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RNF41Q9H4P4 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RNU4-21P-201ENST00000362802 126 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RNU1-39P-201ENST00000383897 165 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 SNORD115.1-201ENST00000391109 76 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RPL21P75-201ENST00000396599 483 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AL445529.1-201ENST00000398713 389 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RPL21P28-201ENST00000401418 483 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AL592114.1-201ENST00000403842 483 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 MTCYBP36-201ENST00000404146 440 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AL139095.1-201ENST00000404326 391 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RPL27AP8-201ENST00000424277 446 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RPL35AP22-201ENST00000436855 335 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AC118469.1-201ENST00000442943 488 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 HIGD1AP2-201ENST00000446367 280 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AC009961.3-201ENST00000449832 765 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RNA5SP310-201ENST00000459084 116 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RPL21P39-201ENST00000463605 483 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 MTND3P7-201ENST00000474435 343 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RPL21P93-201ENST00000480465 489 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 BET1P1-201ENST00000482276 359 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AC233702.1-201ENST00000482905 502 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AC087190.1-201ENST00000484462 480 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AC093591.1-201ENST00000491435 481 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RPS15AP36-201ENST00000492022 382 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RPL21P16-201ENST00000495531 483 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RPF2P2-201ENST00000504693 896 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AL359273.1-201ENST00000510918 627 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AC116347.2-201ENST00000514912 523 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RNU6-201P-201ENST00000517100 61 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 CASP1P1-201ENST00000526345 212 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 MIR5697-201ENST00000578045 78 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AL357094.1-201ENST00000603845 844 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AC092354.1-201ENST00000606057 376 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AC010149.2-201ENST00000637608 315 ntBASIC2.75□□□□□ -1.97
RNF41Q9H4P4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RNF41Q9H4P4 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 SNORA25.6-201ENST00000364121 118 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms