Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 Y_RNA.480-201ENST00000384364 102 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 RNU6-1179P-201ENST00000384667 107 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 RNU2-33P-201ENST00000410344 192 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 RPS4XP13-201ENST00000483219 789 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 SUMO2P6-201ENST00000505273 288 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 AC009901.1-201ENST00000506703 541 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 Y_RNA.691-201ENST00000516611 103 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 RNA5SP309-201ENST00000516670 106 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 RNU7-143P-201ENST00000516781 65 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 IGKV2D-19-201ENST00000523346 262 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 OR8R1P-201ENST00000543943 764 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 AC093027.1-201ENST00000546698 429 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 AL157871.3-201ENST00000557231 293 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 MTCO3P23-201ENST00000561363 289 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 AC090574.1-201ENST00000623186 233 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 AC048347.1-201ENST00000624621 427 ntBASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCDC113Q9H0I3 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AC007785.2-201ENST00000598627 1916 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 Y_RNA.33-201ENST00000362591 102 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 Y_RNA.67-201ENST00000362870 100 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 Y_RNA.813-201ENST00000364639 102 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 RNU6-395P-201ENST00000365662 106 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 MIR578-201ENST00000384828 96 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 SNORA57.1-201ENST00000391227 145 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 VN1R36P-201ENST00000414936 291 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AL139396.1-201ENST00000421137 167 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AL158156.1-201ENST00000422509 473 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 RPL23AP69-201ENST00000431134 458 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 RPS24P13-201ENST00000442520 397 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AL162151.2-201ENST00000448875 158 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AL451050.1-201ENST00000450126 415 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 RNU6-323P-201ENST00000521915 107 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 TRAV28-201ENST00000557548 323 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 VN1R85P-201ENST00000601587 426 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AC008785.1-201ENST00000624475 456 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 AL672296.1-201ENST00000427780 2158 ntBASIC4.47□□□□□ -1.69
CCDC113Q9H0I3 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC113Q9H0I3 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
CCDC113Q9H0I3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC007685.1-201ENST00000329806 452 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 SNORA60-201ENST00000362396 134 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 RNU4-79P-201ENST00000362764 141 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 Y_RNA.58-201ENST00000362807 102 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 Y_RNA.154-201ENST00000363624 102 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 RN7SKP280-201ENST00000364196 304 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 RNA5SP513-201ENST00000364648 118 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 RNY3P1-201ENST00000365085 102 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 RNY3-201ENST00000365484 102 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 Y_RNA.490-201ENST00000384413 102 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 SNORA37-201ENST00000384504 129 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 RNU6-1025P-201ENST00000410629 104 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 RPS20P15-201ENST00000412792 311 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC074085.1-201ENST00000413598 418 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC073063.1-201ENST00000434352 607 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC092573.2-201ENST00000434546 243 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 HMGB1P12-201ENST00000438594 598 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC107399.1-201ENST00000451226 265 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 CECR9-201ENST00000453421 199 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 RPS23P3-201ENST00000470993 430 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 HMGB1P30-201ENST00000492455 606 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 MTND3P25-201ENST00000509243 135 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC008716.1-201ENST00000511084 513 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 RNU6-566P-201ENST00000516790 107 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC069113.1-201ENST00000517763 267 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC113139.1-201ENST00000605049 239 ntBASIC4.46□□□□□ -1.7
CCDC113Q9H0I3 AC012603.1-201ENST00000606424 528 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms