Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
VPS25Q9BRG1 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
VPS25Q9BRG1 ARPC3P5-201ENST00000448802 534 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 AL137159.1-201ENST00000452808 512 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 RPS15AP36-201ENST00000492022 382 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 CKS1BP2-201ENST00000497342 240 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.03□□□□□ -2.24
VPS25Q9BRG1 RNA5SP445-201ENST00000515889 115 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 SNORA25.11-201ENST00000515935 105 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 SNORA48.11-201ENST00000517015 89 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.03□□□□□ -2.24
VPS25Q9BRG1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
VPS25Q9BRG1 AC006199.1-201ENST00000548728 219 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC1.03□□□□□ -2.24
VPS25Q9BRG1 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.03□□□□□ -2.24
VPS25Q9BRG1 AC005261.5-201ENST00000596280 355 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.03□□□□□ -2.24
VPS25Q9BRG1 U1.36-201ENST00000620684 176 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 MIR6075-201ENST00000620782 95 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 MIR7843-201ENST00000622274 79 ntBASIC1.03□□□□□ -2.24
VPS25Q9BRG1 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.03□□□□□ -2.24
VPS25Q9BRG1 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.03□□□□□ -2.24
VPS25Q9BRG1 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
VPS25Q9BRG1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VPS25Q9BRG1 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.02□□□□□ -2.25
VPS25Q9BRG1 RNU4-53P-201ENST00000410828 140 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC005345.1-201ENST00000431868 217 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 USP9YP24-201ENST00000434374 697 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 MTCO1P53-201ENST00000441633 699 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS25Q9BRG1 NDUFA5P7-201ENST00000452914 242 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 MTCO1P18-201ENST00000455518 1419 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC112492.4-201ENST00000456549 352 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC007182.2-201ENST00000489251 402 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC084024.2-201ENST00000503480 791 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 SMURF2P1-201ENST00000514992 481 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 RNA5SP61-201ENST00000516453 100 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS25Q9BRG1 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC084851.1-201ENST00000529105 249 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AP004247.1-201ENST00000531556 1289 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC135279.1-201ENST00000543493 504 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 ATP5F1P7-201ENST00000567330 760 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC005951.2-201ENST00000576282 495 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.02□□□□□ -2.25
VPS25Q9BRG1 SNRPGP17-201ENST00000603780 214 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC010900.2-201ENST00000604508 210 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC012468.1-201ENST00000604888 430 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AL050343.2-201ENST00000607338 280 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC004067.1-201ENST00000608733 700 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC103710.1-201ENST00000610003 901 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AL359314.1-201ENST00000616913 261 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 MIR3199-2-201ENST00000636243 86 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 MTND1P37-201ENST00000636562 264 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC087821.2-201ENST00000637086 450 ntBASIC1.02□□□□□ -2.25
VPS25Q9BRG1 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.01□□□□□ -2.25
VPS25Q9BRG1 SNORA5B-201ENST00000363786 132 ntBASIC1.01□□□□□ -2.25
VPS25Q9BRG1 SNORA64-201ENST00000384674 134 ntBASIC1.01□□□□□ -2.25
VPS25Q9BRG1 AL356057.1-202ENST00000402263 756 ntBASIC1.01□□□□□ -2.25
VPS25Q9BRG1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.01□□□□□ -2.25
VPS25Q9BRG1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS25Q9BRG1 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
VPS25Q9BRG1 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS25Q9BRG1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.01□□□□□ -2.25
VPS25Q9BRG1 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.01□□□□□ -2.25
VPS25Q9BRG1 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
VPS25Q9BRG1 AC005832.3-201ENST00000537929 631 ntBASIC1.01□□□□□ -2.25
VPS25Q9BRG1 AC024224.1-201ENST00000538284 609 ntBASIC1.01□□□□□ -2.25
VPS25Q9BRG1 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.01□□□□□ -2.25
VPS25Q9BRG1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.01□□□□□ -2.25
VPS25Q9BRG1 BX322635.1-201ENST00000605804 496 ntBASIC1.01□□□□□ -2.25
VPS25Q9BRG1 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS25Q9BRG1 AC096577.2-201ENST00000611455 153 ntBASIC1.01□□□□□ -2.25
VPS25Q9BRG1 AC073569.3-201ENST00000619055 682 ntBASIC1.01□□□□□ -2.25
VPS25Q9BRG1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
VPS25Q9BRG1 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1□□□□□ -2.25
VPS25Q9BRG1 CBX3P1-201ENST00000325243 554 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 SNORA22-201ENST00000383907 134 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 SNORA22C-201ENST00000384614 134 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 RN7SKP101-201ENST00000411376 320 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1□□□□□ -2.25
VPS25Q9BRG1 HMGN2P3-201ENST00000433603 273 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 HMGN2P5-201ENST00000436882 273 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1□□□□□ -2.25
VPS25Q9BRG1 AC003989.2-201ENST00000440224 169 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 AL929288.2-201ENST00000446368 407 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 RAD1P2-201ENST00000446414 663 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 AC245517.4-201ENST00000448601 281 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1□□□□□ -2.25
VPS25Q9BRG1 FCF1P6-201ENST00000456841 595 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 RPS3AP14-201ENST00000483907 780 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1□□□□□ -2.25
VPS25Q9BRG1 COX7A2P2-201ENST00000505291 250 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1□□□□□ -2.25
VPS25Q9BRG1 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1□□□□□ -2.25
VPS25Q9BRG1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1□□□□□ -2.25
VPS25Q9BRG1 NACAP3-201ENST00000552100 481 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 AC005668.1-201ENST00000571142 476 ntBASIC1□□□□□ -2.25
VPS25Q9BRG1 MIR3944-201ENST00000581277 108 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms