Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 MIR301A-201ENST00000385261 86 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 AL136116.1-201ENST00000403591 381 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 RNU6-373P-201ENST00000411247 98 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.4□□□□□ -1.87
NPAS1Q99742 Z85995.1-201ENST00000415547 335 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 AC007390.1-201ENST00000415722 356 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 HSPD1P21-201ENST00000436541 245 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 AC104058.1-201ENST00000448028 297 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 AL354685.2-201ENST00000448218 1447 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.4□□□□□ -1.87
NPAS1Q99742 AL133162.1-201ENST00000463228 453 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 FTH1P2-201ENST00000466086 412 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.4□□□□□ -1.87
NPAS1Q99742 AC084357.1-201ENST00000473404 255 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 RPL21P99-201ENST00000480369 423 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 RPL30P5-201ENST00000494923 336 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.4□□□□□ -1.87
NPAS1Q99742 SUB1P1-201ENST00000524415 382 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
NPAS1Q99742 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.4□□□□□ -1.87
NPAS1Q99742 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 AC034105.4-201ENST00000568304 277 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 BNIP3P30-201ENST00000601184 574 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 AL161798.1-201ENST00000604630 131 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 BRDTP1-201ENST00000605735 677 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 uc_338.34-201ENST00000617467 174 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 MTND1P37-201ENST00000636562 264 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
NPAS1Q99742 AC004972.1-201ENST00000623934 2209 ntBASIC3.4□□□□□ -1.87
NPAS1Q99742 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.4□□□□□ -1.87
NPAS1Q99742 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NPAS1Q99742 CASC19-280ENST00000642102 1351 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPAS1Q99742 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPAS1Q99742 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPAS1Q99742 AC093536.2-201ENST00000565257 1406 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPAS1Q99742 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
NPAS1Q99742 RNU1-64P-201ENST00000365443 163 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPAS1Q99742 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPAS1Q99742 EI24P2-201ENST00000397776 1076 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 HLFP1-201ENST00000402375 499 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AL139397.2-201ENST00000404529 772 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 RNU2-33P-201ENST00000410344 192 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.39□□□□□ -1.87
NPAS1Q99742 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 RPS15AP6-201ENST00000420703 385 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AL160275.3-201ENST00000423876 471 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 NDUFB1P1-201ENST00000435191 180 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 HMGB1P31-201ENST00000437242 427 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.39□□□□□ -1.87
NPAS1Q99742 CECR9-201ENST00000453421 199 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.39□□□□□ -1.87
NPAS1Q99742 RNU6-685P-201ENST00000517088 95 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 RNU1-45P-201ENST00000517191 141 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AC023632.4-201ENST00000517783 191 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AC022690.1-201ENST00000526681 550 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AP005435.4-201ENST00000529514 284 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.39□□□□□ -1.87
NPAS1Q99742 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.39□□□□□ -1.87
NPAS1Q99742 AL121576.1-201ENST00000556055 276 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 TRAV28-201ENST00000557548 323 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.39□□□□□ -1.87
NPAS1Q99742 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.39□□□□□ -1.87
NPAS1Q99742 AC015917.1-201ENST00000579654 510 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AL020997.2-201ENST00000602607 184 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AC005344.1-201ENST00000613391 459 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AP001486.3-201ENST00000615334 372 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AC039056.2-201ENST00000622261 511 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AC100810.6-201ENST00000638068 285 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 AC119674.1-207ENST00000641355 633 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPAS1Q99742 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
NPAS1Q99742 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.39□□□□□ -1.87
NPAS1Q99742 AP004289.2-201ENST00000444413 1457 ntBASIC3.39□□□□□ -1.87
NPAS1Q99742 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
NPAS1Q99742 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
NPAS1Q99742 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
NPAS1Q99742 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
NPAS1Q99742 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.38□□□□□ -1.87
NPAS1Q99742 RNU6-451P-201ENST00000362921 107 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 AC002075.2-201ENST00000425207 252 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 RPL36AP53-201ENST00000432891 316 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.38□□□□□ -1.87
NPAS1Q99742 AL121601.2-201ENST00000438019 707 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 Z82210.1-201ENST00000440037 231 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 NOTCH2P1-201ENST00000443481 624 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 MTND3P16-201ENST00000452205 344 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 SCARNA18-201ENST00000459004 134 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 RNU6-358P-201ENST00000516564 75 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.38□□□□□ -1.87
NPAS1Q99742 CASP1P1-201ENST00000526345 212 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.38□□□□□ -1.87
NPAS1Q99742 BNIP3P6-201ENST00000549284 499 ntBASIC3.38□□□□□ -1.87
NPAS1Q99742 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.38□□□□□ -1.87
NPAS1Q99742 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.38□□□□□ -1.87
NPAS1Q99742 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.38□□□□□ -1.87
NPAS1Q99742 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
NPAS1Q99742 MIR548S-201ENST00000581352 82 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms