Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH4Q99466 MIR422A-201ENST00000362286 90 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 Y_RNA.46-201ENST00000362695 102 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 Y_RNA.187-201ENST00000363918 113 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 Y_RNA.197-201ENST00000364004 102 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 RNY1P12-201ENST00000364251 105 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 MIR558-201ENST00000384920 94 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 MRPL42P3-201ENST00000401492 326 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 AC078974.1-201ENST00000411597 223 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 RPS12P24-201ENST00000412619 387 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 AC006548.1-201ENST00000427470 102 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 AC105272.1-201ENST00000438604 198 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH4Q99466 AC093677.1-201ENST00000514414 678 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 RNU4-29P-201ENST00000515943 174 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 Y_RNA.691-201ENST00000516611 103 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 SNORA48.10-201ENST00000516965 160 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 AP001804.3-201ENST00000525146 880 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 AL080274.1-201ENST00000605565 220 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 CR381572.1-201ENST00000625098 102 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 AC107081.3-201ENST00000612715 2034 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
NOTCH4Q99466 AL451142.2-201ENST00000429076 2090 ntBASIC3.28□□□□□ -1.88
NOTCH4Q99466 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.28□□□□□ -1.88
NOTCH4Q99466 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.28□□□□□ -1.89
NOTCH4Q99466 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC007496.3-201ENST00000624987 3443 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH4Q99466 Y_RNA.135-201ENST00000363439 95 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 Y_RNA.202-201ENST00000364083 110 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC126124.2-201ENST00000413542 321 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 ARL5AP1-201ENST00000418991 388 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC007283.2-201ENST00000424739 197 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 AL035666.1-201ENST00000446195 348 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC008264.1-201ENST00000447612 367 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 RNU7-59P-201ENST00000459101 61 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 RPL7P47-201ENST00000497299 556 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 RN7SKP219-201ENST00000516825 296 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC022616.6-201ENST00000520479 119 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AP003497.1-201ENST00000528472 562 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC135001.1-201ENST00000544546 283 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC018552.3-201ENST00000567416 561 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 MIR4738-201ENST00000579134 87 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 AP000654.2-201ENST00000605633 586 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC023813.4-201ENST00000607580 580 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH4Q99466 AL450472.3-201ENST00000615578 367 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH4Q99466 SCN1A-220ENST00000641603 12506 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH4Q99466 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH4Q99466 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
NOTCH4Q99466 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 Y_RNA.31-201ENST00000362574 102 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 RNU6-115P-201ENST00000364310 107 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 SNORA71.1-201ENST00000364523 117 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 RNU6-282P-201ENST00000365357 103 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 Y_RNA.459-201ENST00000384251 102 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 MT-TR-201ENST00000387439 65 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 RNU6-1148P-201ENST00000410992 104 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 RNU6-954P-201ENST00000411355 107 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 HMGB1P11-201ENST00000413899 637 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC092832.1-201ENST00000422934 400 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 AP1S2P1-201ENST00000457344 379 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 Y_RNA.653-201ENST00000459091 95 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 IGKV2-36-201ENST00000519999 223 ntBASIC3.27□□□□□ -1.89
NOTCH4Q99466 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.27□□□□□ -1.89
NOTCH4Q99466 NDUFB9P3-201ENST00000521269 501 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms