Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.95□□□□□ -1.94
PDLIM5Q96HC4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PDLIM5Q96HC4 AL353743.1-202ENST00000431724 1695 ntBASIC2.95□□□□□ -1.94
PDLIM5Q96HC4 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 Y_RNA.46-201ENST00000362695 102 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 SNORD56.5-201ENST00000364281 72 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 RNU6-533P-201ENST00000384144 107 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 RNU6-809P-201ENST00000384461 107 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 Y_RNA.505-201ENST00000384489 102 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 SNORA48.7-201ENST00000391302 135 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 Y_RNA.598-201ENST00000410480 95 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 RNU2-16P-201ENST00000410712 136 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC078974.1-201ENST00000411597 223 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 HMGN1P14-201ENST00000412459 517 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 RPL7P10-201ENST00000417407 739 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 BTF3L4P3-201ENST00000418879 476 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC098614.2-201ENST00000426040 255 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 MRPS17P3-201ENST00000465453 385 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 RN7SL504P-201ENST00000494496 287 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC113155.1-201ENST00000511141 769 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 RNA5SP385-201ENST00000515947 110 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC022634.1-201ENST00000520765 532 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AP003122.4-201ENST00000530980 758 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 MTND1P15-201ENST00000579262 949 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AL136363.2-201ENST00000604173 851 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC112191.3-201ENST00000604371 277 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC090970.3-201ENST00000612566 866 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 AC004696.1-201ENST00000614345 607 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 CR848007.1-201ENST00000442354 1699 ntBASIC2.94□□□□□ -1.94
PDLIM5Q96HC4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 RNU6-884P-201ENST00000363889 107 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 RNU6-1180P-201ENST00000364935 107 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 SNORA40.3-201ENST00000390964 122 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AL031121.1-201ENST00000406553 254 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 CYCSP32-201ENST00000440548 321 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 UBBP3-201ENST00000445497 241 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AL358232.1-201ENST00000448030 501 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AL033528.1-201ENST00000453780 140 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC117440.1-201ENST00000474107 571 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC055855.1-201ENST00000489563 579 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC008885.1-201ENST00000514930 301 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 RNU6-405P-201ENST00000516637 110 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 ZNF519P3-201ENST00000557158 1032 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC009977.1-201ENST00000586015 570 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC068790.6-201ENST00000602558 258 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC012150.2-201ENST00000621300 544 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 AC099654.13-201ENST00000639774 207 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 MTND5P29-201ENST00000458676 1807 ntBASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
PDLIM5Q96HC4 MTND4P5-201ENST00000435821 1374 ntBASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 AC093010.3-201ENST00000570269 15214 ntBASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 Y_RNA.41-201ENST00000362646 102 ntBASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 Y_RNA.517-201ENST00000384551 106 ntBASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 FO393413.1-201ENST00000402892 195 ntBASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 Y_RNA.599-201ENST00000410489 109 ntBASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 RN7SKP58-201ENST00000411010 305 ntBASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 AC093151.1-201ENST00000427711 313 ntBASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 HMGB1P27-201ENST00000431429 603 ntBASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.92□□□□□ -1.94
PDLIM5Q96HC4 RPL12P25-201ENST00000455592 494 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 131.9 ms