Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 BTF3P12-201ENST00000519620 469 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 AC087241.2-201ENST00000535801 324 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 AC027807.1-201ENST00000559921 996 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 AP001269.3-201ENST00000588718 329 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 AC002545.1-201ENST00000592511 181 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 MTND3P19-201ENST00000603825 345 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 MTND4LP5-201ENST00000605152 292 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 RNU1-91P-201ENST00000364746 163 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 RNU6-750P-201ENST00000390946 107 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 RNU4-22P-201ENST00000411058 166 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AL139415.2-201ENST00000431968 163 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 EEF1A1P39-201ENST00000440791 250 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 TPT1P14-201ENST00000448018 505 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AC004263.1-201ENST00000479327 332 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AL160314.1-201ENST00000490836 438 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 RNU5F-8P-201ENST00000515941 111 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 RNU6-927P-201ENST00000516199 100 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 SCARNA16.3-201ENST00000516595 184 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AP000889.2-201ENST00000532684 490 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AC009712.1-201ENST00000564938 316 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 RPS3AP23-202ENST00000574601 686 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AL357094.1-201ENST00000603845 844 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 MIR203B-201ENST00000636080 86 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 AC099654.8-201ENST00000637757 681 ntBASIC2.21□□□□□ -2.06
ECHDC3Q96DC8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 RNU6-432P-201ENST00000384196 109 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 SNORA70B-201ENST00000384210 135 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 USP9YP33-201ENST00000412220 421 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 USP9YP27-201ENST00000418455 438 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 RPS25P9-201ENST00000435591 252 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 USP9YP35-201ENST00000435696 412 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 RSU1P2-202ENST00000437884 485 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 FAM103A2P-201ENST00000444122 354 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC020550.1-201ENST00000447385 163 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AP000542.1-201ENST00000448473 371 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 MTATP6P14-201ENST00000455189 673 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 RPL26P9-201ENST00000457466 433 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC013267.1-201ENST00000458227 267 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 RPS15AP36-201ENST00000492022 382 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 ANXA2P1-201ENST00000505539 926 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC098591.2-201ENST00000510152 315 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC112206.4-201ENST00000515142 405 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC110760.3-202ENST00000515177 371 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC007349.4-201ENST00000608114 532 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AL589743.7-201ENST00000612637 233 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AL449363.1-201ENST00000617815 186 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC068057.2-201ENST00000624047 895 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 MTND4P27-201ENST00000450813 1354 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 MTND5P33-201ENST00000571250 1450 ntBASIC2.2□□□□□ -2.06
ECHDC3Q96DC8 AC099786.3-201ENST00000565735 1410 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 RNU6-778P-201ENST00000363269 103 ntBASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
ECHDC3Q96DC8 SNORA6-201ENST00000384033 151 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms