Protein–RNA interactions for Protein: Q8NCU8

LINC00116, Uncharacterized protein encoded by LINC00116, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116Q8NCU8 RNU6-685P-201ENST00000517088 95 ntBASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 AL121576.1-201ENST00000556055 276 ntBASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 AL355812.1-201ENST00000603215 216 ntBASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 AL138889.2-201ENST00000603883 242 ntBASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 AC006077.1-201ENST00000604746 343 ntBASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 U2.17-201ENST00000611454 95 ntBASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 MIR6128-201ENST00000615528 109 ntBASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 ATP5A1P2-202ENST00000616464 443 ntBASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 SNHG22-203ENST00000617833 660 ntBASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 AC098657.3-201ENST00000620434 263 ntBASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 AC022418.1-201ENST00000624118 445 ntBASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
LINC00116Q8NCU8 AL359893.1-201ENST00000447628 1580 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 KPNA2P1-201ENST00000458289 1591 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 AC090337.1-201ENST00000579651 2074 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 AL133383.2-201ENST00000622958 2336 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 SNORA75B-201ENST00000384053 137 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 RNU6-1032P-201ENST00000384100 107 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 RNU6-505P-201ENST00000384427 107 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 RNU4-65P-201ENST00000410473 140 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 AC017083.1-201ENST00000428093 483 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 RPL21P112-201ENST00000434403 463 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 snoU109.4-201ENST00000458953 143 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 DYNLL1P5-201ENST00000467158 270 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 RPL32P34-201ENST00000486380 400 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 AC097473.1-201ENST00000508142 408 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 Y_RNA.661-201ENST00000516003 99 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 RNU6-123P-201ENST00000516163 102 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 AC100870.1-201ENST00000522035 505 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 AL158032.1-201ENST00000605401 106 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 PISRT1.1-201ENST00000616930 107 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 AL122125.1-201ENST00000616999 600 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 AL591424.2-201ENST00000617023 128 ntBASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
LINC00116Q8NCU8 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 AC139713.2-215ENST00000641428 5037 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 ZNF807-201ENST00000328088 1707 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 RNU6-1115P-201ENST00000362490 106 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 RNU6-593P-201ENST00000364716 112 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 RNA5SP111-201ENST00000411386 101 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 RPL7P10-201ENST00000417407 739 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 DBIP2-201ENST00000419076 262 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 AC008481.1-201ENST00000463278 396 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 AP001486.1-201ENST00000463339 476 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 AC104472.2-201ENST00000469035 601 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 TRBV1-201ENST00000476502 284 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 AC025554.1-201ENST00000505641 188 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 SNORA25.10-201ENST00000515926 124 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 RNU6-764P-201ENST00000516396 105 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 RNU6-1016P-201ENST00000516689 94 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 RPL23AP84-201ENST00000571193 464 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 MIR4472-2-201ENST00000582069 67 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 MIR3941-201ENST00000582572 103 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 YPEL5P2-201ENST00000605553 359 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 TUG1_2.1-201ENST00000614234 87 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 AC007485.1-201ENST00000616755 206 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 AC092608.2-201ENST00000624427 218 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 AL596275.2-204ENST00000641628 552 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 AL596275.2-206ENST00000641957 626 ntBASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
LINC00116Q8NCU8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 RNU6-1318P-201ENST00000365389 103 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 SMIM11P1-201ENST00000369586 178 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 RNU6-890P-201ENST00000384121 107 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 Y_RNA.493-201ENST00000384422 102 ntBASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC4.72□□□□□ -1.65
LINC00116Q8NCU8 MIR548F4-201ENST00000408515 105 ntBASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 123.5 ms