Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 RNA5SP471-201ENST00000516971 106 ntBASIC2.89□□□□□ -1.95
CCDC63Q8NA47 RPS3AP4-201ENST00000555161 764 ntBASIC2.89□□□□□ -1.95
CCDC63Q8NA47 MIR5680-201ENST00000577577 84 ntBASIC2.89□□□□□ -1.95
CCDC63Q8NA47 SEPT7P9-203ENST00000604116 343 ntBASIC2.89□□□□□ -1.95
CCDC63Q8NA47 AP001506.1-201ENST00000615444 211 ntBASIC2.89□□□□□ -1.95
CCDC63Q8NA47 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC63Q8NA47 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC63Q8NA47 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AL390237.1-201ENST00000404226 1415 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 SNORA25.6-201ENST00000364121 118 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 SNORA75-201ENST00000384158 137 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 Y_RNA.553-201ENST00000384670 102 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 MRPL42P2-201ENST00000403169 426 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 SNORA11B-201ENST00000408175 129 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 RNU6-195P-201ENST00000411352 109 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 HMGB3P12-201ENST00000438745 556 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 USP9YP15-201ENST00000442391 422 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 MTCO1P19-201ENST00000443487 500 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AL360221.1-201ENST00000445989 335 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC013267.1-201ENST00000458227 267 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 snoU109.1-201ENST00000459339 135 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC117440.1-201ENST00000474107 571 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AIG1P1-201ENST00000503376 148 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 RNU6-1220P-201ENST00000517126 108 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC022616.3-201ENST00000523940 148 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC068135.2-201ENST00000569293 1028 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC020895.1-201ENST00000595362 272 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC007363.1-201ENST00000604736 620 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC019159.1-201ENST00000605094 187 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC087752.4-201ENST00000605911 462 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC034102.8-201ENST00000615146 484 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC002064.3-201ENST00000623448 346 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC099654.7-201ENST00000635788 2127 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC63Q8NA47 AC008669.1-201ENST00000565823 2178 ntBASIC2.88□□□□□ -1.95
CCDC63Q8NA47 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 RNY4P34-201ENST00000364779 95 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 SNORA9.2-201ENST00000365361 133 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 RNU6-39P-201ENST00000384344 107 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 RNU6-348P-201ENST00000384386 107 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AL356057.2-201ENST00000403318 432 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC006366.1-201ENST00000422002 759 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 RAC1P6-201ENST00000423911 575 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AL159987.2-201ENST00000432754 307 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC119618.1-201ENST00000434191 222 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 RPS24P13-201ENST00000442520 397 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 MRPL50P4-201ENST00000446432 475 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 SNORD97-201ENST00000459187 142 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC010424.1-201ENST00000506336 297 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 NDUFB4P2-201ENST00000509515 391 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 MIR3167-201ENST00000579623 85 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC138761.3-201ENST00000579993 334 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 RSL24D1P11-201ENST00000591045 491 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AL161729.4-201ENST00000604650 476 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC090578.1-201ENST00000604955 591 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC009509.4-201ENST00000619202 509 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 AC091953.5-201ENST00000622919 233 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 PISRT1-201ENST00000626175 531 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 CR848007.1-201ENST00000442354 1699 ntBASIC2.87□□□□□ -1.95
CCDC63Q8NA47 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CCDC63Q8NA47 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.86□□□□□ -1.95
CCDC63Q8NA47 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.86□□□□□ -1.95
CCDC63Q8NA47 AL049781.1-201ENST00000623195 3585 ntBASIC2.86□□□□□ -1.95
CCDC63Q8NA47 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CCDC63Q8NA47 AC138915.1-201ENST00000565427 1685 ntBASIC2.86□□□□□ -1.95
CCDC63Q8NA47 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
CCDC63Q8NA47 HSPE1P11-201ENST00000339579 310 ntBASIC2.86□□□□□ -1.95
CCDC63Q8NA47 FTLP6-201ENST00000355274 422 ntBASIC2.86□□□□□ -1.95
CCDC63Q8NA47 RNU6-1167P-201ENST00000363227 94 ntBASIC2.86□□□□□ -1.95
CCDC63Q8NA47 SNORD56.2-201ENST00000363242 71 ntBASIC2.86□□□□□ -1.95
CCDC63Q8NA47 RNU6-188P-201ENST00000364207 107 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms