Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 AL356057.1-201ENST00000533798 831 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 HMGB1P14-201ENST00000557424 591 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 MIR5680-201ENST00000577577 84 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 MIR3670-2-201ENST00000582974 65 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 MIR3670-1-201ENST00000584160 65 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 MIR3670-3-201ENST00000584855 65 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 ZNF861P-201ENST00000588126 639 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 BNIP3P22-201ENST00000593399 556 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 AC110760.3-201ENST00000598794 467 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 KC877982.1-201ENST00000602313 470 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 AL606834.2-201ENST00000602954 668 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 AL359999.1-201ENST00000604513 294 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 MIR92B-201ENST00000607575 96 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 AC103710.1-201ENST00000610003 901 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 MIR3670-4-201ENST00000612260 65 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 AC006133.1-201ENST00000617106 264 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 MIR6075-201ENST00000620782 95 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 AC009878.1-201ENST00000621819 340 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 Z69908.1-201ENST00000622603 247 ntBASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC71LQ8N9Z2 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.34□□□□□ -2.04
CCDC71LQ8N9Z2 AC096644.4-201ENST00000563417 2912 ntBASIC2.34□□□□□ -2.04
CCDC71LQ8N9Z2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.34□□□□□ -2.04
CCDC71LQ8N9Z2 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.34□□□□□ -2.04
CCDC71LQ8N9Z2 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 RNU6-884P-201ENST00000363889 107 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 RNY3P13-201ENST00000365542 102 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 MIR449B-201ENST00000384995 97 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 SNORD115.1-201ENST00000391109 76 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 Y_RNA.598-201ENST00000410480 95 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 ELOCP17-201ENST00000414751 326 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 RPS15AP12-201ENST00000419498 388 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 ZNF863P-201ENST00000426746 417 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AL714022.1-201ENST00000439897 151 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 MRPL50P4-201ENST00000446432 475 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 ST13P20-201ENST00000447996 1065 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 RPS27P26-201ENST00000494583 239 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC080014.1-201ENST00000496877 1201 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC093534.1-201ENST00000504977 132 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 MTND5P13-201ENST00000513046 1079 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 SNORA67.7-201ENST00000516664 135 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC107934.1-201ENST00000522215 217 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC022878.1-201ENST00000530684 149 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC004486.1-201ENST00000546846 233 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC093012.1-202ENST00000549403 582 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 MIR3118-1-201ENST00000581787 76 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 MIR3158-1-201ENST00000583596 81 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 MIR4293-201ENST00000584305 78 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 HMGN2P15-201ENST00000585707 270 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 BNIP3P8-201ENST00000597863 560 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC024153.1-201ENST00000603103 365 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC008277.2-201ENST00000605196 797 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC005046.1-201ENST00000608515 625 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 BX664608.1-201ENST00000610519 487 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC006338.1-201ENST00000618453 749 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC091953.2-201ENST00000623979 160 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 CR381653.2-201ENST00000624041 768 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 AC092593.1-201ENST00000515413 1815 ntBASIC2.33□□□□□ -2.04
CCDC71LQ8N9Z2 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 RNU1-105P-201ENST00000363470 161 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 SNORA67.1-201ENST00000364749 141 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 RNU6-217P-201ENST00000384164 104 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 RN7SKP142-201ENST00000411236 328 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC080125.1-201ENST00000414888 684 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC098826.1-201ENST00000433943 471 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 MTND1P28-201ENST00000435623 950 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 CYCSP32-201ENST00000440548 321 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC020550.1-201ENST00000447385 163 ntBASIC2.32□□□□□ -2.04
CCDC71LQ8N9Z2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms