Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC021171.1-201ENST00000603137 706 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AC136601.2-201ENST00000604356 474 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AC010133.1-201ENST00000615809 842 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AC013470.4-201ENST00000619978 986 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 UCA1.1-201ENST00000620952 75 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AL160394.1-201ENST00000624765 724 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AC004944.1-201ENST00000517807 3059 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 MIRLET7G-201ENST00000362280 84 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 RNU6-741P-201ENST00000383889 107 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 RSL24D1P4-201ENST00000400938 484 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC083875.1-201ENST00000419509 405 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 RPL7L1P10-201ENST00000427790 463 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 MTND1P32-201ENST00000433043 938 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 UBE2V1P13-201ENST00000436983 439 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 ARPC3P1-201ENST00000437218 533 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AL049734.2-201ENST00000441066 616 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 MTATP6P30-201ENST00000443540 664 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 HIGD1AP2-201ENST00000446367 280 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 PAXBP1P1-201ENST00000449315 447 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 RNU7-23P-201ENST00000459465 62 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 RPS20P22-201ENST00000473700 357 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 RPS15AP36-201ENST00000492022 382 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 GTF2IP9-201ENST00000502460 301 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC105185.1-201ENST00000518705 535 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 MTND4P33-201ENST00000556706 766 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 RPS3AP23-202ENST00000574601 686 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 SNORD53-201ENST00000579969 78 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AL161729.4-201ENST00000604650 476 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC097468.3-201ENST00000607956 456 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC007349.4-201ENST00000608114 532 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC016597.2-201ENST00000613256 341 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC009090.3-201ENST00000616553 565 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 PCMTD1P7-201ENST00000634506 357 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC006927.4-201ENST00000639187 543 ntBASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC65Q8IXS2 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 MIR513B-201ENST00000385136 84 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AL139397.2-201ENST00000404529 772 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 MIR320C1-201ENST00000408566 88 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 RNU2-33P-201ENST00000410344 192 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 RNU6-584P-201ENST00000410350 95 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 MTND1P23-201ENST00000416931 372 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 RPL23AP49-201ENST00000492925 468 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 SNORA31.18-201ENST00000517043 134 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AL391261.3-201ENST00000557194 520 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 VN1R82P-201ENST00000601481 356 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AL450336.1-201ENST00000605180 586 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AC009831.4-201ENST00000620744 325 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AC073308.1-201ENST00000623696 305 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 AL356596.1-201ENST00000624230 379 ntBASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC65Q8IXS2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 SNORA68.1-201ENST00000364537 132 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 RNU6-723P-201ENST00000383973 107 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 MIR19A-201ENST00000384878 82 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 MIR221-201ENST00000385135 110 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 RPL17P50-201ENST00000396131 546 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 TXNP7-201ENST00000406296 293 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms