Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC074029.2-201ENST00000551045 634 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AC146944.4-201ENST00000602697 718 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AL136363.1-201ENST00000605349 337 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AC012443.1-201ENST00000605605 231 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AC106052.1-201ENST00000608029 497 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 RNU6-1331P-201ENST00000363658 106 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 PTGES3P2-201ENST00000407942 482 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AL500527.1-201ENST00000448532 255 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AC067942.3-201ENST00000512025 362 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 RNA5SP471-201ENST00000516971 106 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 CBX3P7-201ENST00000532876 502 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 SNRPGP16-201ENST00000533275 226 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AC022880.1-201ENST00000534017 973 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AC008269.2-201ENST00000561915 1105 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AL109918.3-201ENST00000603072 338 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AC107214.2-201ENST00000608204 634 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AC091304.6-201ENST00000619761 202 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 RNU6-629P-201ENST00000384061 103 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 SDAD1P3-201ENST00000427380 333 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 RNU1-98P-201ENST00000458992 160 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AC096745.1-201ENST00000509945 370 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AP003717.3-201ENST00000544832 1180 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 LINC00933-203ENST00000559812 219 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 MIR4711-201ENST00000578274 70 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 MIR4723-201ENST00000585070 81 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 AC015726.3-201ENST00000624501 418 ntBASIC0.75□□□□□ -2.29
CSPG4Q6UVK1 RNU6-532P-201ENST00000384318 107 ntBASIC0.74□□□□□ -2.29
CSPG4Q6UVK1 MIR320B1-201ENST00000390209 79 ntBASIC0.74□□□□□ -2.29
CSPG4Q6UVK1 MTND4LP21-201ENST00000415303 295 ntBASIC0.74□□□□□ -2.29
CSPG4Q6UVK1 MIR548Y-201ENST00000582739 110 ntBASIC0.74□□□□□ -2.29
CSPG4Q6UVK1 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.74□□□□□ -2.29
CSPG4Q6UVK1 RNU6-335P-201ENST00000364563 113 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 SNORA81-201ENST00000408493 178 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 MTCYBP24-201ENST00000420387 1106 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 TPMTP4-201ENST00000450749 678 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 RPL31P58-201ENST00000469001 379 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 DEFB108E-201ENST00000524692 240 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 CENPUP2-201ENST00000555897 1186 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 AC090616.5-202ENST00000582111 297 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 AP006248.3-201ENST00000623580 594 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 AC006963.1-201ENST00000624003 1052 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 RNU6-222P-201ENST00000362438 107 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 UBE2V1P9-201ENST00000414760 368 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 MRPS36P1-201ENST00000421291 307 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 AC012497.1-201ENST00000429392 575 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 RPL31P20-201ENST00000449593 360 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 RNA5SP285-201ENST00000516619 119 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 MTCYBP41-201ENST00000528913 1123 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 MIR3117-201ENST00000584034 78 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 AC097655.1-201ENST00000635075 318 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 AL589743.1-201ENST00000551932 2712 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 MTND4P27-201ENST00000450813 1354 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 AC091812.1-201ENST00000432235 1948 ntBASIC0.73□□□□□ -2.29
CSPG4Q6UVK1 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AL138880.1-201ENST00000405824 642 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AP002371.1-201ENST00000463604 433 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 PRELID3BP4-201ENST00000515476 571 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AC025423.2-201ENST00000537570 439 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AC109809.1-201ENST00000619665 545 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AC091932.3-201ENST00000624223 323 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 ZNF37BP-203ENST00000452306 1352 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 U8.3-201ENST00000363321 132 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AL133384.1-201ENST00000412744 351 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AL606495.1-201ENST00000422100 813 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 OR51AB1P-201ENST00000429046 620 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 RPS27P1-201ENST00000450552 247 ntBASIC0.72□□□□□ -2.29
CSPG4Q6UVK1 AC005410.1-202ENST00000460347 485 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms