Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AC018638.7-201ENST00000605836 1114 ntBASIC0.85□□□□□ -2.27
HMGN3Q15651 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC0.85□□□□□ -2.27
HMGN3Q15651 OR4G11P-202ENST00000642116 1414 ntBASIC0.85□□□□□ -2.27
HMGN3Q15651 MIR378A-201ENST00000362177 66 ntBASIC0.84□□□□□ -2.27
HMGN3Q15651 AL136372.1-201ENST00000403060 228 ntBASIC0.84□□□□□ -2.27
HMGN3Q15651 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.84□□□□□ -2.27
HMGN3Q15651 MTND2P19-201ENST00000449129 1012 ntBASIC0.84□□□□□ -2.27
HMGN3Q15651 RNU6-420P-201ENST00000458780 107 ntBASIC0.84□□□□□ -2.27
HMGN3Q15651 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.84□□□□□ -2.27
HMGN3Q15651 MRPS33P3-201ENST00000513456 322 ntBASIC0.84□□□□□ -2.27
HMGN3Q15651 AC107953.1-201ENST00000522216 297 ntBASIC0.84□□□□□ -2.27
HMGN3Q15651 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.84□□□□□ -2.27
HMGN3Q15651 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.84□□□□□ -2.27
HMGN3Q15651 AC090116.1-201ENST00000615679 446 ntBASIC0.84□□□□□ -2.27
HMGN3Q15651 AC090132.2-201ENST00000615881 347 ntBASIC0.84□□□□□ -2.27
HMGN3Q15651 Z99571.1-201ENST00000636677 394 ntBASIC0.84□□□□□ -2.27
HMGN3Q15651 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.84□□□□□ -2.27
HMGN3Q15651 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
HMGN3Q15651 AC008568.2-201ENST00000623862 2313 ntBASIC0.84□□□□□ -2.28
HMGN3Q15651 TEX21P-201ENST00000447107 1476 ntBASIC0.84□□□□□ -2.28
HMGN3Q15651 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
HMGN3Q15651 AL391987.6-201ENST00000305671 199 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 RNA5SP99-201ENST00000364020 114 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 RNU4-38P-201ENST00000364472 129 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 RNU6-1187P-201ENST00000364771 110 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 MIR618-201ENST00000385287 98 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 NPM1P10-201ENST00000398310 865 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGN3Q15651 SNRPEP10-201ENST00000420249 274 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 RPL27AP8-201ENST00000424277 446 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGN3Q15651 HMGB1P9-201ENST00000429856 646 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC0.83□□□□□ -2.28
HMGN3Q15651 DDX3P2-201ENST00000446138 111 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 MTCO1P48-201ENST00000448024 1096 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGN3Q15651 RPL31P53-201ENST00000457065 348 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 PABPC1P3-201ENST00000469174 459 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 NAA50-206ENST00000493454 964 ntTSL 2 BASIC0.83□□□□□ -2.28
HMGN3Q15651 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.83□□□□□ -2.28
HMGN3Q15651 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGN3Q15651 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC0.83□□□□□ -2.28
HMGN3Q15651 DUXAP5-201ENST00000529668 529 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC0.83□□□□□ -2.28
HMGN3Q15651 POLR2KP1-201ENST00000553226 168 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGN3Q15651 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGN3Q15651 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGN3Q15651 AC008121.1-201ENST00000603244 268 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGN3Q15651 AC005021.1-201ENST00000608730 355 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGN3Q15651 AC093838.1-201ENST00000613014 469 ntBASIC0.83□□□□□ -2.28
HMGN3Q15651 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.82□□□□□ -2.28
HMGN3Q15651 RNU6-1226P-201ENST00000384317 107 ntBASIC0.82□□□□□ -2.28
HMGN3Q15651 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.82□□□□□ -2.28
HMGN3Q15651 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC0.82□□□□□ -2.28
HMGN3Q15651 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGN3Q15651 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGN3Q15651 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC0.82□□□□□ -2.28
HMGN3Q15651 AC087343.1-201ENST00000477341 475 ntBASIC0.82□□□□□ -2.28
HMGN3Q15651 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGN3Q15651 AC132942.1-201ENST00000486753 483 ntBASIC0.82□□□□□ -2.28
HMGN3Q15651 HMGB1P35-201ENST00000503360 598 ntBASIC0.82□□□□□ -2.28
HMGN3Q15651 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGN3Q15651 AP005660.1-201ENST00000522972 293 ntBASIC0.82□□□□□ -2.28
HMGN3Q15651 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.82□□□□□ -2.28
HMGN3Q15651 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGN3Q15651 AC019288.1-201ENST00000557918 224 ntBASIC0.82□□□□□ -2.28
HMGN3Q15651 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.82□□□□□ -2.28
HMGN3Q15651 AP000942.3-201ENST00000603702 160 ntBASIC0.82□□□□□ -2.28
HMGN3Q15651 BNIP3P4-201ENST00000604946 565 ntBASIC0.82□□□□□ -2.28
HMGN3Q15651 AC012443.1-201ENST00000605605 231 ntBASIC0.82□□□□□ -2.28
HMGN3Q15651 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGN3Q15651 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
HMGN3Q15651 AK9-203ENST00000368948 2478 ntTSL 5 BASIC0.81□□□□□ -2.28
HMGN3Q15651 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC0.81□□□□□ -2.28
HMGN3Q15651 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
HMGN3Q15651 AC005539.1-201ENST00000443768 1479 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 MTND5P9-201ENST00000503854 1755 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 MIR424-201ENST00000362227 98 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 RNU6-31P-201ENST00000384388 108 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 RNU6-748P-201ENST00000384648 107 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 RNU6-482P-201ENST00000391068 107 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 RPL21P90-201ENST00000415692 466 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC0.81□□□□□ -2.28
HMGN3Q15651 AC023512.1-201ENST00000444513 499 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 RPL39P28-201ENST00000465655 155 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 AC099513.1-201ENST00000490423 301 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC0.81□□□□□ -2.28
HMGN3Q15651 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 SCARNA3-201ENST00000517097 143 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC0.81□□□□□ -2.28
HMGN3Q15651 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.81□□□□□ -2.28
HMGN3Q15651 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.81□□□□□ -2.28
HMGN3Q15651 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC0.81□□□□□ -2.28
HMGN3Q15651 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC0.81□□□□□ -2.28
HMGN3Q15651 AC074051.3-201ENST00000570238 358 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 AC104763.3-201ENST00000613765 618 ntBASIC0.81□□□□□ -2.28
HMGN3Q15651 AP003400.5-201ENST00000624827 617 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 149 ms