Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 MIR3941-201ENST00000582572 103 ntBASIC4.49□□□□□ -1.69
SSRP1Q08945 AL161798.1-201ENST00000604630 131 ntBASIC4.49□□□□□ -1.69
SSRP1Q08945 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.49□□□□□ -1.69
SSRP1Q08945 C2orf27A-204ENST00000623058 969 ntBASIC4.49□□□□□ -1.69
SSRP1Q08945 AC090574.1-201ENST00000623186 233 ntBASIC4.49□□□□□ -1.69
SSRP1Q08945 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SSRP1Q08945 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SSRP1Q08945 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSRP1Q08945 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.49□□□□□ -1.69
SSRP1Q08945 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
SSRP1Q08945 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSRP1Q08945 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.48□□□□□ -1.69
SSRP1Q08945 ZNF285B-201ENST00000561698 1767 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 RNU6-1252P-201ENST00000363054 104 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 RNU6-254P-201ENST00000363377 107 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 RNU6-213P-201ENST00000384051 104 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 MIR199A2-201ENST00000385289 110 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 RNU6-628P-201ENST00000410675 107 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 CYP4F29P-201ENST00000420685 446 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.48□□□□□ -1.69
SSRP1Q08945 AL500522.2-201ENST00000448562 343 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 RPL31P60-201ENST00000478450 367 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.48□□□□□ -1.69
SSRP1Q08945 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.48□□□□□ -1.69
SSRP1Q08945 AC090877.1-201ENST00000561418 344 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 MIR5692A1-201ENST00000580523 69 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 AC113139.1-201ENST00000605049 239 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.48□□□□□ -1.69
SSRP1Q08945 AC135507.2-201ENST00000612443 309 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.48□□□□□ -1.69
SSRP1Q08945 AL442067.2-201ENST00000614033 363 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.48□□□□□ -1.69
SSRP1Q08945 AL512643.1-201ENST00000635735 524 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 Z99571.1-201ENST00000636677 394 ntBASIC4.48□□□□□ -1.69
SSRP1Q08945 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.48□□□□□ -1.69
SSRP1Q08945 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSRP1Q08945 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SSRP1Q08945 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
SSRP1Q08945 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.48□□□□□ -1.69
SSRP1Q08945 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSRP1Q08945 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SSRP1Q08945 AC008568.2-201ENST00000623862 2313 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSRP1Q08945 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.47□□□□□ -1.69
SSRP1Q08945 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.47□□□□□ -1.69
SSRP1Q08945 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSRP1Q08945 Y_RNA.58-201ENST00000362807 102 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 Y_RNA.67-201ENST00000362870 100 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 RN7SKP44-201ENST00000363602 316 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 Y_RNA.154-201ENST00000363624 102 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 RNY3P1-201ENST00000365085 102 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 RNY3-201ENST00000365484 102 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SSRP1Q08945 Y_RNA.384-201ENST00000383909 102 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 Y_RNA.490-201ENST00000384413 102 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 RNU2-71P-201ENST00000411395 189 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 AC063979.1-201ENST00000415539 377 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.47□□□□□ -1.69
SSRP1Q08945 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.47□□□□□ -1.69
SSRP1Q08945 FTH1P6-201ENST00000430768 320 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.47□□□□□ -1.69
SSRP1Q08945 AL121877.1-201ENST00000453704 622 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.47□□□□□ -1.69
SSRP1Q08945 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.47□□□□□ -1.69
SSRP1Q08945 RPL7P5-201ENST00000471472 736 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 AL160314.1-201ENST00000490836 438 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 HMGN1P13-201ENST00000505795 138 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 TBCAP3-201ENST00000512475 312 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 SNORA14.1-201ENST00000516113 141 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 RNU6-256P-201ENST00000516747 97 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 RNU6-273P-201ENST00000516937 96 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.47□□□□□ -1.69
SSRP1Q08945 OR5D17P-201ENST00000531492 978 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.47□□□□□ -1.69
SSRP1Q08945 OR8R1P-201ENST00000543943 764 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.47□□□□□ -1.69
SSRP1Q08945 MIR548AC-201ENST00000585049 88 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 AC044792.1-201ENST00000593294 196 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 AC106900.2-201ENST00000604994 317 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 MIR6875-201ENST00000617506 72 ntBASIC4.47□□□□□ -1.69
SSRP1Q08945 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSRP1Q08945 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSRP1Q08945 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSRP1Q08945 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SSRP1Q08945 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.46□□□□□ -1.7
SSRP1Q08945 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SSRP1Q08945 RNU6-371P-201ENST00000364283 108 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 SNORA4.3-201ENST00000365564 137 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 RNU6-741P-201ENST00000383889 107 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 MIR301A-201ENST00000385261 86 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 HLFP1-201ENST00000402375 499 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 PPIAP31-201ENST00000405422 495 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 RPS4XP7-201ENST00000406274 780 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 RNA5SP239-201ENST00000410218 129 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSRP1Q08945 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.46□□□□□ -1.7
SSRP1Q08945 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.46□□□□□ -1.7
SSRP1Q08945 RPS24P13-201ENST00000442520 397 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.46□□□□□ -1.7
SSRP1Q08945 AC133473.1-201ENST00000455173 299 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms