Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC0.69□□□□□ -2.3
TFF3Q07654 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.69□□□□□ -2.3
TFF3Q07654 AC135507.1-201ENST00000607214 561 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.69□□□□□ -2.3
TFF3Q07654 AC243773.3-201ENST00000613270 256 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 AC009541.1-201ENST00000438279 2662 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 ZBTB8OSP1-201ENST00000342688 498 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 SNORD26-201ENST00000384147 75 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
TFF3Q07654 RPL21P32-201ENST00000419877 477 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 AC004383.1-201ENST00000438135 289 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 RABEPKP1-201ENST00000440529 1026 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 NEFMP1-201ENST00000443423 1006 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.68□□□□□ -2.3
TFF3Q07654 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC0.68□□□□□ -2.3
TFF3Q07654 AC139453.3-201ENST00000493276 369 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 AC023141.11-201ENST00000508864 202 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 SNORA31.13-201ENST00000516624 135 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC0.68□□□□□ -2.3
TFF3Q07654 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.68□□□□□ -2.3
TFF3Q07654 AC133485.1-201ENST00000567176 124 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 AC138907.6-201ENST00000568401 126 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 COX6CP3-201ENST00000580869 223 ntBASIC0.68□□□□□ -2.3
TFF3Q07654 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC0.68□□□□□ -2.3
TFF3Q07654 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.68□□□□□ -2.3
TFF3Q07654 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
TFF3Q07654 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
TFF3Q07654 SEPT2P1-201ENST00000419651 180 ntBASIC0.67□□□□□ -2.3
TFF3Q07654 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.67□□□□□ -2.3
TFF3Q07654 OFD1P12Y-201ENST00000427963 1207 ntBASIC0.67□□□□□ -2.3
TFF3Q07654 LAMTOR3P1-201ENST00000428620 370 ntBASIC0.67□□□□□ -2.3
TFF3Q07654 AC092989.1-201ENST00000481235 277 ntBASIC0.67□□□□□ -2.3
TFF3Q07654 RNU6-351P-201ENST00000516097 100 ntBASIC0.67□□□□□ -2.3
TFF3Q07654 OR5B19P-201ENST00000531766 928 ntBASIC0.67□□□□□ -2.3
TFF3Q07654 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC0.67□□□□□ -2.3
TFF3Q07654 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC0.67□□□□□ -2.3
TFF3Q07654 AL512605.2-201ENST00000592972 256 ntBASIC0.67□□□□□ -2.3
TFF3Q07654 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
TFF3Q07654 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.67□□□□□ -2.3
TFF3Q07654 DDX10P1-201ENST00000448545 1933 ntBASIC0.67□□□□□ -2.3
TFF3Q07654 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.67□□□□□ -2.3
TFF3Q07654 AP000776.1-201ENST00000530032 1663 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 AC068700.1-201ENST00000565862 3754 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 MIR26B-201ENST00000362251 77 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 STAT4-203ENST00000409995 709 ntTSL 5 BASIC0.66□□□□□ -2.3
TFF3Q07654 FCF1P2-201ENST00000415284 583 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 AL356320.2-201ENST00000417263 507 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 TOMM22P2-201ENST00000430735 237 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 AC005534.2-201ENST00000431047 433 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 OR6C72P-201ENST00000451403 892 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 RPL31P41-201ENST00000477967 372 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 AP001960.1-201ENST00000506494 658 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 AC103851.1-201ENST00000506833 274 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 PRELID3BP4-201ENST00000515476 571 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC0.66□□□□□ -2.3
TFF3Q07654 AC090525.3-201ENST00000605601 189 ntBASIC0.66□□□□□ -2.3
TFF3Q07654 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.66□□□□□ -2.3
TFF3Q07654 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.65□□□□□ -2.3
TFF3Q07654 AC110792.3-201ENST00000595906 1614 ntBASIC0.65□□□□□ -2.31
TFF3Q07654 MIR508-201ENST00000384857 115 ntBASIC0.65□□□□□ -2.31
TFF3Q07654 MIR146A-201ENST00000385201 99 ntBASIC0.65□□□□□ -2.31
TFF3Q07654 TRIM60P13-201ENST00000432350 1283 ntBASIC0.65□□□□□ -2.31
TFF3Q07654 USP12PX-201ENST00000432383 1057 ntBASIC0.65□□□□□ -2.31
TFF3Q07654 RPS27AP10-201ENST00000496103 208 ntBASIC0.65□□□□□ -2.31
TFF3Q07654 AC087854.1-201ENST00000519706 414 ntBASIC0.65□□□□□ -2.31
TFF3Q07654 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC0.65□□□□□ -2.31
TFF3Q07654 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.65□□□□□ -2.31
TFF3Q07654 AC040174.2-201ENST00000602701 465 ntBASIC0.65□□□□□ -2.31
TFF3Q07654 AC007742.2-201ENST00000618226 398 ntBASIC0.65□□□□□ -2.31
TFF3Q07654 AL136313.1-201ENST00000624804 202 ntBASIC0.65□□□□□ -2.31
TFF3Q07654 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.65□□□□□ -2.31
TFF3Q07654 SNORA1.3-201ENST00000384676 136 ntBASIC0.64□□□□□ -2.31
TFF3Q07654 MIR625-201ENST00000385047 85 ntBASIC0.64□□□□□ -2.31
TFF3Q07654 RPS4XP3-201ENST00000398541 413 ntBASIC0.64□□□□□ -2.31
TFF3Q07654 ATP6V0E1P3-201ENST00000420036 246 ntBASIC0.64□□□□□ -2.31
TFF3Q07654 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC0.64□□□□□ -2.31
TFF3Q07654 RPL31P20-201ENST00000449593 360 ntBASIC0.64□□□□□ -2.31
TFF3Q07654 SNORA48.11-201ENST00000517015 89 ntBASIC0.64□□□□□ -2.31
TFF3Q07654 AC104997.1-201ENST00000519761 717 ntBASIC0.64□□□□□ -2.31
TFF3Q07654 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC0.64□□□□□ -2.31
TFF3Q07654 HSPE1P19-201ENST00000603327 295 ntBASIC0.64□□□□□ -2.31
TFF3Q07654 AL138955.1-201ENST00000622881 1040 ntBASIC0.64□□□□□ -2.31
TFF3Q07654 CR848007.1-201ENST00000442354 1699 ntBASIC0.64□□□□□ -2.31
TFF3Q07654 SDAD1P2-201ENST00000441308 2028 ntBASIC0.64□□□□□ -2.31
TFF3Q07654 AC087359.1-201ENST00000508335 1740 ntBASIC0.64□□□□□ -2.31
TFF3Q07654 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
TFF3Q07654 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
TFF3Q07654 RNU1-72P-201ENST00000362976 153 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 MIR193B-201ENST00000384907 83 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 RN7SKP61-201ENST00000410642 295 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.63□□□□□ -2.31
TFF3Q07654 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC0.63□□□□□ -2.31
TFF3Q07654 RPL23AP6-201ENST00000446637 472 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC0.63□□□□□ -2.31
TFF3Q07654 AC079448.1-201ENST00000449377 373 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.63□□□□□ -2.31
TFF3Q07654 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TFF3Q07654 AC112198.4-201ENST00000515450 351 ntBASIC0.63□□□□□ -2.31
TFF3Q07654 AC103833.1-201ENST00000517442 172 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms