Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC022655.2-201ENST00000577280 318 ntBASIC4.1□□□□□ -1.75
IRF9Q00978 AC100830.2-201ENST00000581636 240 ntBASIC4.1□□□□□ -1.75
IRF9Q00978 MIR4715-201ENST00000584117 79 ntBASIC4.1□□□□□ -1.75
IRF9Q00978 AL157817.1-201ENST00000614264 790 ntBASIC4.1□□□□□ -1.75
IRF9Q00978 AC133104.2-201ENST00000615272 193 ntBASIC4.1□□□□□ -1.75
IRF9Q00978 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
IRF9Q00978 AL773545.4-201ENST00000637262 310 ntBASIC4.1□□□□□ -1.75
IRF9Q00978 AL513478.4-201ENST00000641636 310 ntBASIC4.1□□□□□ -1.75
IRF9Q00978 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.1□□□□□ -1.75
IRF9Q00978 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
IRF9Q00978 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
IRF9Q00978 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
IRF9Q00978 MTND5P10-201ENST00000603719 1809 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
IRF9Q00978 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.09□□□□□ -1.75
IRF9Q00978 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
IRF9Q00978 AC138393.1-203ENST00000327086 343 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 Y_RNA.33-201ENST00000362591 102 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 RNU6-395P-201ENST00000365662 106 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 Y_RNA.395-201ENST00000383945 109 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 RNU6-1179P-201ENST00000384667 107 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 RNU6-95P-201ENST00000384697 107 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 MIR607-201ENST00000385241 96 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.09□□□□□ -1.75
IRF9Q00978 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.09□□□□□ -1.75
IRF9Q00978 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.09□□□□□ -1.75
IRF9Q00978 AL353621.1-201ENST00000418219 243 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.09□□□□□ -1.75
IRF9Q00978 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.09□□□□□ -1.75
IRF9Q00978 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.09□□□□□ -1.75
IRF9Q00978 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.09□□□□□ -1.75
IRF9Q00978 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.09□□□□□ -1.75
IRF9Q00978 FABP5P15-201ENST00000453566 214 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 MTCO3P10-201ENST00000455912 772 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 RPL23AP24-201ENST00000458203 385 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 AC084198.1-201ENST00000477747 402 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 AP000926.1-201ENST00000479573 241 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 AC090096.1-201ENST00000489168 390 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 HMGB1P30-201ENST00000492455 606 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 RPL31P61-201ENST00000496160 376 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.09□□□□□ -1.75
IRF9Q00978 Y_RNA.711-201ENST00000516993 102 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 RNU1-54P-201ENST00000517181 120 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.09□□□□□ -1.75
IRF9Q00978 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.09□□□□□ -1.75
IRF9Q00978 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.09□□□□□ -1.75
IRF9Q00978 FAM27D1-201ENST00000612308 341 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 LINC00901.1-201ENST00000617252 152 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 MIR6810-201ENST00000622701 70 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 AL669831.3-213ENST00000636676 183 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
IRF9Q00978 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
IRF9Q00978 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
IRF9Q00978 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
IRF9Q00978 KPNA2P1-201ENST00000458289 1591 ntBASIC4.09□□□□□ -1.75
IRF9Q00978 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.09□□□□□ -1.76
IRF9Q00978 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
IRF9Q00978 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
IRF9Q00978 AC116096.1-201ENST00000566804 2314 ntBASIC4.09□□□□□ -1.76
IRF9Q00978 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
IRF9Q00978 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
IRF9Q00978 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
IRF9Q00978 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.08□□□□□ -1.76
IRF9Q00978 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
IRF9Q00978 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
IRF9Q00978 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
IRF9Q00978 RNA5SP447-201ENST00000363749 119 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 Y_RNA.197-201ENST00000364004 102 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 Y_RNA.216-201ENST00000364205 93 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 RNU1-132P-201ENST00000364300 164 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 Y_RNA.245-201ENST00000364493 95 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 RNU6-741P-201ENST00000383889 107 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 RNU2-3P-201ENST00000410144 191 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 RNU2-33P-201ENST00000410344 192 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 RNU4-25P-201ENST00000410569 230 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
IRF9Q00978 CYCSP33-201ENST00000414485 327 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.08□□□□□ -1.76
IRF9Q00978 MTND2P23-201ENST00000422990 651 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 C4BPAP2-201ENST00000428434 478 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 AL590383.1-201ENST00000428602 75 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 AC007919.1-201ENST00000429380 217 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 HMGB1P9-201ENST00000429856 646 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 RPS29P17-201ENST00000430795 166 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 GPM6BP2-201ENST00000432046 144 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 RANP8-201ENST00000444720 713 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 GPM6BP1-201ENST00000446387 144 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 NIPA2P5-201ENST00000452282 464 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 RPL31P13-201ENST00000484151 370 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 AC096745.1-201ENST00000509945 370 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 AC005921.1-201ENST00000510589 286 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 AC008958.1-201ENST00000511047 682 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.08□□□□□ -1.76
IRF9Q00978 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.08□□□□□ -1.76
IRF9Q00978 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.08□□□□□ -1.76
IRF9Q00978 AC018555.1-201ENST00000567548 1980 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.08□□□□□ -1.76
IRF9Q00978 AC005183.1-201ENST00000603687 1979 ntBASIC4.08□□□□□ -1.76
IRF9Q00978 NUTF2P8-201ENST00000604593 363 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms