Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC1.12□□□□□ -2.23
UBA52P62987 RPS6P15-201ENST00000431996 751 ntBASIC1.12□□□□□ -2.23
UBA52P62987 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.12□□□□□ -2.23
UBA52P62987 MTND2P19-201ENST00000449129 1012 ntBASIC1.12□□□□□ -2.23
UBA52P62987 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC1.12□□□□□ -2.23
UBA52P62987 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC1.12□□□□□ -2.23
UBA52P62987 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.12□□□□□ -2.23
UBA52P62987 AC023813.2-201ENST00000564321 469 ntBASIC1.12□□□□□ -2.23
UBA52P62987 AL078603.1-201ENST00000603824 313 ntBASIC1.12□□□□□ -2.23
UBA52P62987 PRR13P7-201ENST00000605538 430 ntBASIC1.12□□□□□ -2.23
UBA52P62987 AP002826.1-201ENST00000608835 315 ntBASIC1.12□□□□□ -2.23
UBA52P62987 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.12□□□□□ -2.23
UBA52P62987 AC008568.2-201ENST00000623862 2313 ntBASIC1.12□□□□□ -2.23
UBA52P62987 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBA52P62987 DSTNP4-201ENST00000399472 474 ntBASIC1.11□□□□□ -2.23
UBA52P62987 AL590084.1-201ENST00000407885 387 ntBASIC1.11□□□□□ -2.23
UBA52P62987 AL136133.1-201ENST00000413694 376 ntBASIC1.11□□□□□ -2.23
UBA52P62987 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC1.11□□□□□ -2.23
UBA52P62987 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.11□□□□□ -2.23
UBA52P62987 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.11□□□□□ -2.23
UBA52P62987 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC1.11□□□□□ -2.23
UBA52P62987 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.11□□□□□ -2.23
UBA52P62987 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.11□□□□□ -2.23
UBA52P62987 AP000254.1-201ENST00000609934 520 ntBASIC1.11□□□□□ -2.23
UBA52P62987 AC106730.3-201ENST00000624568 641 ntBASIC1.11□□□□□ -2.23
UBA52P62987 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.11□□□□□ -2.23
UBA52P62987 AC068620.4-201ENST00000636730 1182 ntBASIC1.11□□□□□ -2.23
UBA52P62987 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
UBA52P62987 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
UBA52P62987 RNU1-72P-201ENST00000362976 153 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNU6-1-201ENST00000383898 107 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNU6-203P-201ENST00000384038 104 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNU6-42P-201ENST00000384165 107 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNU6-36P-201ENST00000384172 107 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNU6-4P-201ENST00000384205 107 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNU6-5P-201ENST00000384238 107 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNU6-3P-201ENST00000384314 107 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNU6-1035P-201ENST00000384477 107 ntBASIC1.1□□□□□ -2.23
UBA52P62987 SNORA8-201ENST00000384574 139 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNU6-2-201ENST00000384627 107 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNU6-9-201ENST00000384776 107 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNU6-33P-201ENST00000384793 107 ntBASIC1.1□□□□□ -2.23
UBA52P62987 SSXP10-201ENST00000402595 565 ntBASIC1.1□□□□□ -2.23
UBA52P62987 MIR1285-1-201ENST00000408593 84 ntBASIC1.1□□□□□ -2.23
UBA52P62987 EDDM3CP-201ENST00000415977 425 ntBASIC1.1□□□□□ -2.23
UBA52P62987 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.1□□□□□ -2.23
UBA52P62987 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC1.1□□□□□ -2.23
UBA52P62987 AL121594.1-201ENST00000475906 575 ntBASIC1.1□□□□□ -2.23
UBA52P62987 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
UBA52P62987 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
UBA52P62987 AC114801.2-201ENST00000503825 781 ntBASIC1.1□□□□□ -2.23
UBA52P62987 LTV1P1-201ENST00000510683 1237 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNA5SP220-201ENST00000516298 104 ntBASIC1.1□□□□□ -2.23
UBA52P62987 RNA5SP165-201ENST00000517142 115 ntBASIC1.1□□□□□ -2.23
UBA52P62987 NDUFA5P6-201ENST00000542110 379 ntBASIC1.1□□□□□ -2.23
UBA52P62987 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.1□□□□□ -2.23
UBA52P62987 POLR2KP1-201ENST00000553226 168 ntBASIC1.1□□□□□ -2.23
UBA52P62987 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.1□□□□□ -2.23
UBA52P62987 MIR3198-2-201ENST00000577868 80 ntBASIC1.1□□□□□ -2.23
UBA52P62987 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.1□□□□□ -2.23
UBA52P62987 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.1□□□□□ -2.23
UBA52P62987 RNU6-6P-201ENST00000606623 107 ntBASIC1.1□□□□□ -2.23
UBA52P62987 AC103810.8-201ENST00000607347 118 ntBASIC1.1□□□□□ -2.23
UBA52P62987 U4atac.1-201ENST00000618345 95 ntBASIC1.1□□□□□ -2.23
UBA52P62987 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.1□□□□□ -2.23
UBA52P62987 MTND4P8-201ENST00000514997 1362 ntBASIC1.09□□□□□ -2.23
UBA52P62987 OR4G1P-203ENST00000641984 1631 ntBASIC1.09□□□□□ -2.23
UBA52P62987 AC016716.1-201ENST00000265882 708 ntBASIC1.09□□□□□ -2.23
UBA52P62987 HMGN2P39-201ENST00000398005 273 ntBASIC1.09□□□□□ -2.23
UBA52P62987 RPL30P13-201ENST00000418873 348 ntBASIC1.09□□□□□ -2.23
UBA52P62987 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.09□□□□□ -2.23
UBA52P62987 MICF-203ENST00000432679 129 ntBASIC1.09□□□□□ -2.23
UBA52P62987 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.09□□□□□ -2.23
UBA52P62987 YWHAZP8-201ENST00000436935 731 ntBASIC1.09□□□□□ -2.23
UBA52P62987 RPL23AP16-201ENST00000441715 421 ntBASIC1.09□□□□□ -2.23
UBA52P62987 RPL31P53-201ENST00000457065 348 ntBASIC1.09□□□□□ -2.23
UBA52P62987 AC093752.1-206ENST00000511823 336 ntBASIC1.09□□□□□ -2.23
UBA52P62987 AC022447.1-201ENST00000515358 464 ntBASIC1.09□□□□□ -2.23
UBA52P62987 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.09□□□□□ -2.23
UBA52P62987 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC1.09□□□□□ -2.23
UBA52P62987 AP004247.1-201ENST00000531556 1289 ntBASIC1.09□□□□□ -2.23
UBA52P62987 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.09□□□□□ -2.23
UBA52P62987 AC136443.5-201ENST00000603741 370 ntBASIC1.09□□□□□ -2.23
UBA52P62987 AL050343.2-201ENST00000607338 280 ntBASIC1.09□□□□□ -2.23
UBA52P62987 MIR6734-201ENST00000621166 68 ntBASIC1.09□□□□□ -2.23
UBA52P62987 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.09□□□□□ -2.24
UBA52P62987 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.24
UBA52P62987 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
UBA52P62987 ZNF29P-201ENST00000225587 168 ntBASIC1.08□□□□□ -2.24
UBA52P62987 SNORD114-22-201ENST00000365423 72 ntBASIC1.08□□□□□ -2.24
UBA52P62987 BTF3L4P2-201ENST00000392798 346 ntBASIC1.08□□□□□ -2.24
UBA52P62987 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.08□□□□□ -2.24
UBA52P62987 HMGB1P9-201ENST00000429856 646 ntBASIC1.08□□□□□ -2.24
UBA52P62987 RPL36P19-201ENST00000430744 301 ntBASIC1.08□□□□□ -2.24
UBA52P62987 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.08□□□□□ -2.24
UBA52P62987 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC1.08□□□□□ -2.24
UBA52P62987 AL096803.2-201ENST00000450032 677 ntBASIC1.08□□□□□ -2.24
UBA52P62987 SUMO2P6-201ENST00000505273 288 ntBASIC1.08□□□□□ -2.24
UBA52P62987 AF131216.2-201ENST00000512316 564 ntBASIC1.08□□□□□ -2.24
UBA52P62987 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms