Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC064859.1-201ENST00000624741 174 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 MTND5P29-201ENST00000458676 1807 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 ZNF355P-201ENST00000427301 3216 ntBASIC1.15□□□□□ -2.22
CKS1BP61024 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
CKS1BP61024 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CKS1BP61024 MIR424-201ENST00000362227 98 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 RNU4-82P-201ENST00000362443 140 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 MIR525-201ENST00000384978 85 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 RN7SKP223-201ENST00000410582 62 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 RN7SKP192-201ENST00000411291 327 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 OR51A3P-201ENST00000413596 924 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
CKS1BP61024 BOLA3P4-201ENST00000418151 400 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 AL645568.3-201ENST00000433683 316 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC241584.1-201ENST00000438469 1241 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC023790.1-201ENST00000482174 347 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.15□□□□□ -2.23
CKS1BP61024 RPS27AP10-201ENST00000496103 208 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.15□□□□□ -2.23
CKS1BP61024 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC023825.1-201ENST00000566704 1030 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 AC106734.1-201ENST00000568646 663 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 AC104581.2-201ENST00000572227 430 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC004067.1-201ENST00000608733 700 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 AL590808.1-201ENST00000618696 141 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.15□□□□□ -2.23
CKS1BP61024 AC099842.1-201ENST00000619919 596 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 MIR3199-2-201ENST00000636243 86 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 AP000776.1-201ENST00000530032 1663 ntBASIC1.15□□□□□ -2.23
CKS1BP61024 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CKS1BP61024 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC1.14□□□□□ -2.23
CKS1BP61024 RNU6-115P-201ENST00000364310 107 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 RNA5SP88-201ENST00000365560 109 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
CKS1BP61024 MIR95-201ENST00000385072 81 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 AL079342.1-201ENST00000401460 267 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 SNORA11-201ENST00000408789 128 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 RPL23AP39-201ENST00000415533 405 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 AC008173.1-201ENST00000418901 264 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 AL160275.3-201ENST00000423876 471 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 PSMA6P3-201ENST00000428242 164 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.14□□□□□ -2.23
CKS1BP61024 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.14□□□□□ -2.23
CKS1BP61024 RPL30P9-201ENST00000465586 330 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 AL049873.1-201ENST00000480540 376 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.14□□□□□ -2.23
CKS1BP61024 RNA5SP182-201ENST00000516064 82 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.14□□□□□ -2.23
CKS1BP61024 AP005435.4-201ENST00000529514 284 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.14□□□□□ -2.23
CKS1BP61024 NACAP3-201ENST00000552100 481 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
CKS1BP61024 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.14□□□□□ -2.23
CKS1BP61024 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.14□□□□□ -2.23
CKS1BP61024 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC1.14□□□□□ -2.23
CKS1BP61024 MTCYBP22-201ENST00000603788 447 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 AC108479.2-201ENST00000617314 601 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 SCARNA15.3-201ENST00000626315 122 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 SCARNA4.1-201ENST00000628597 123 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 MTND1P37-201ENST00000636562 264 ntBASIC1.14□□□□□ -2.23
CKS1BP61024 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.14□□□□□ -2.23
CKS1BP61024 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.14□□□□□ -2.23
CKS1BP61024 SNORA25B-201ENST00000365507 128 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 MIR583-201ENST00000384846 75 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 MCTS2P-201ENST00000394552 546 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 RNU2-2P-201ENST00000410396 191 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 UBE2V1P11-201ENST00000411559 285 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 Z93242.1-201ENST00000427102 353 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 AC007919.1-201ENST00000429380 217 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.13□□□□□ -2.23
CKS1BP61024 MTCO1P53-201ENST00000441633 699 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 RPL7P36-201ENST00000444633 681 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.13□□□□□ -2.23
CKS1BP61024 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.13□□□□□ -2.23
CKS1BP61024 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC1.13□□□□□ -2.23
CKS1BP61024 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.13□□□□□ -2.23
CKS1BP61024 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC1.13□□□□□ -2.23
CKS1BP61024 BPTFP1-201ENST00000579209 492 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 AC103710.2-201ENST00000609912 942 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 U2.15-201ENST00000611544 191 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 U2.16-201ENST00000613119 191 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 U2.12-201ENST00000613778 191 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 U2.20-201ENST00000613956 192 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 U2.9-201ENST00000615427 191 ntBASIC1.13□□□□□ -2.23
CKS1BP61024 U2.11-201ENST00000616345 191 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms