Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC245166.1-201ENST00000521012 253 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
LIMK1P53667 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.11□□□□□ -1.91
LIMK1P53667 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.11□□□□□ -1.91
LIMK1P53667 MIR4319-201ENST00000577285 85 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 AC087241.4-201ENST00000612441 480 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 AC104010.1-201ENST00000616889 150 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 FRG1KP-201ENST00000623592 341 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 AC091953.2-201ENST00000623979 160 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.11□□□□□ -1.91
LIMK1P53667 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
LIMK1P53667 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.11□□□□□ -1.91
LIMK1P53667 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIMK1P53667 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.1□□□□□ -1.91
LIMK1P53667 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
LIMK1P53667 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIMK1P53667 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
LIMK1P53667 AC017071.1-201ENST00000564407 2204 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 AC062016.1-201ENST00000355719 319 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 RNU6-1284P-201ENST00000363701 100 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 RNU6-741P-201ENST00000383889 107 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 RNU6-1035P-201ENST00000384477 107 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 MIR887-201ENST00000401258 79 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 RNU2-25P-201ENST00000411041 191 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.1□□□□□ -1.91
LIMK1P53667 AC244035.1-201ENST00000430042 390 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.1□□□□□ -1.91
LIMK1P53667 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.1□□□□□ -1.91
LIMK1P53667 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.1□□□□□ -1.91
LIMK1P53667 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.1□□□□□ -1.91
LIMK1P53667 AC008264.1-201ENST00000447612 367 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 RPS27AP8-201ENST00000452665 445 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 SNRPFP4-201ENST00000456366 242 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 RPL23AP67-201ENST00000465341 474 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 SEM1P1-201ENST00000506694 209 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 FABP5P5-201ENST00000515537 406 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 AC100870.1-201ENST00000522035 505 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 AC107934.1-201ENST00000522215 217 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.1□□□□□ -1.91
LIMK1P53667 ATP5F1P5-201ENST00000526403 760 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 AP003181.2-201ENST00000528941 181 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.1□□□□□ -1.91
LIMK1P53667 AC091544.4-201ENST00000555268 342 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 MIR3118-1-201ENST00000581787 76 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 DPPA3P3-201ENST00000603842 430 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 AC239868.4-201ENST00000608318 671 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 BX664608.1-201ENST00000610519 487 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 AC008250.2-201ENST00000615261 205 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 AC099506.2-201ENST00000623074 221 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.1□□□□□ -1.91
LIMK1P53667 AL049641.1-201ENST00000441055 1948 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
LIMK1P53667 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.1□□□□□ -1.91
LIMK1P53667 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
LIMK1P53667 AC093831.2-201ENST00000624393 3427 ntBASIC3.1□□□□□ -1.91
LIMK1P53667 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LIMK1P53667 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.91
LIMK1P53667 ELL2P3-201ENST00000457883 1602 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 RNU4-21P-201ENST00000362802 126 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 U3.4-201ENST00000363352 213 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
LIMK1P53667 AL359634.1-202ENST00000404721 284 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.09□□□□□ -1.91
LIMK1P53667 AC019097.1-201ENST00000424783 735 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.09□□□□□ -1.91
LIMK1P53667 HMGB1P27-201ENST00000431429 603 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 FCF1P1-201ENST00000432690 571 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.09□□□□□ -1.91
LIMK1P53667 USP9YP15-201ENST00000442391 422 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AL135938.1-201ENST00000443141 297 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 DDX3P2-201ENST00000446138 111 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AC009961.3-201ENST00000449832 765 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AL513124.1-201ENST00000450410 614 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 LARP1BP2-201ENST00000486594 519 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 RPS27P26-201ENST00000494583 239 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AC091965.2-201ENST00000512324 613 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.09□□□□□ -1.91
LIMK1P53667 Y_RNA.688-201ENST00000516565 95 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.09□□□□□ -1.91
LIMK1P53667 AC060788.1-201ENST00000521318 469 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.09□□□□□ -1.91
LIMK1P53667 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.09□□□□□ -1.91
LIMK1P53667 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.09□□□□□ -1.91
LIMK1P53667 RPL21P5-201ENST00000554662 472 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.09□□□□□ -1.91
LIMK1P53667 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.09□□□□□ -1.91
LIMK1P53667 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.09□□□□□ -1.91
LIMK1P53667 AP000860.1-201ENST00000605250 559 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 RPL23AP88-201ENST00000605759 454 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.09□□□□□ -1.91
LIMK1P53667 uc_338.12-201ENST00000616344 181 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AC108479.2-201ENST00000617314 601 ntBASIC3.09□□□□□ -1.91
LIMK1P53667 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.09□□□□□ -1.91
LIMK1P53667 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.09□□□□□ -1.91
LIMK1P53667 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.09□□□□□ -1.91
LIMK1P53667 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.09□□□□□ -1.91
LIMK1P53667 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
LIMK1P53667 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.08□□□□□ -1.92
LIMK1P53667 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
LIMK1P53667 MIR627-201ENST00000384979 97 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms