Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
COPB1P53618 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.73□□□□□ -1.81
COPB1P53618 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.73□□□□□ -1.81
COPB1P53618 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
COPB1P53618 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.73□□□□□ -1.81
COPB1P53618 AC073343.1-201ENST00000328239 651 ntBASIC3.73□□□□□ -1.81
COPB1P53618 RNU6-188P-201ENST00000364207 107 ntBASIC3.73□□□□□ -1.81
COPB1P53618 SNORA62.1-201ENST00000364287 154 ntBASIC3.73□□□□□ -1.81
COPB1P53618 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COPB1P53618 RNU6-641P-201ENST00000384006 107 ntBASIC3.73□□□□□ -1.81
COPB1P53618 MIR124-3-201ENST00000384866 87 ntBASIC3.73□□□□□ -1.81
COPB1P53618 MIR483-201ENST00000385070 76 ntBASIC3.73□□□□□ -1.81
COPB1P53618 AL359634.1-202ENST00000404721 284 ntBASIC3.73□□□□□ -1.81
COPB1P53618 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.73□□□□□ -1.81
COPB1P53618 RPL21P24-201ENST00000413752 448 ntBASIC3.73□□□□□ -1.81
COPB1P53618 AC114491.1-201ENST00000416095 246 ntBASIC3.73□□□□□ -1.81
COPB1P53618 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.73□□□□□ -1.81
COPB1P53618 TXNP1-201ENST00000441872 371 ntBASIC3.73□□□□□ -1.81
COPB1P53618 MTCO3P45-201ENST00000443036 613 ntBASIC3.73□□□□□ -1.81
COPB1P53618 CBWD4P-201ENST00000445695 655 ntBASIC3.73□□□□□ -1.81
COPB1P53618 ELOCP23-201ENST00000452014 332 ntBASIC3.73□□□□□ -1.81
COPB1P53618 RNU7-182P-201ENST00000459009 62 ntBASIC3.73□□□□□ -1.81
COPB1P53618 SNORD97-201ENST00000459187 142 ntBASIC3.73□□□□□ -1.81
COPB1P53618 AP000873.1-201ENST00000463987 400 ntBASIC3.73□□□□□ -1.81
COPB1P53618 RPS27AP1-201ENST00000475545 471 ntBASIC3.73□□□□□ -1.81
COPB1P53618 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.73□□□□□ -1.81
COPB1P53618 RNU6-1092P-201ENST00000516955 87 ntBASIC3.73□□□□□ -1.81
COPB1P53618 AC104027.1-201ENST00000521887 300 ntBASIC3.73□□□□□ -1.81
COPB1P53618 PSMA2P1-201ENST00000526365 646 ntBASIC3.73□□□□□ -1.81
COPB1P53618 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.73□□□□□ -1.81
COPB1P53618 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.73□□□□□ -1.81
COPB1P53618 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.73□□□□□ -1.81
COPB1P53618 XIAPP1-201ENST00000603162 600 ntBASIC3.73□□□□□ -1.81
COPB1P53618 SRGNP1-201ENST00000603392 451 ntBASIC3.73□□□□□ -1.81
COPB1P53618 HMGN2P28-201ENST00000606102 262 ntBASIC3.73□□□□□ -1.81
COPB1P53618 SNHG22-203ENST00000617833 660 ntBASIC3.73□□□□□ -1.81
COPB1P53618 AL034408.1-202ENST00000636088 415 ntBASIC3.73□□□□□ -1.81
COPB1P53618 DDX10P1-201ENST00000448545 1933 ntBASIC3.73□□□□□ -1.81
COPB1P53618 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
COPB1P53618 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COPB1P53618 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
COPB1P53618 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
COPB1P53618 OR4G1P-203ENST00000641984 1631 ntBASIC3.73□□□□□ -1.81
COPB1P53618 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.73□□□□□ -1.81
COPB1P53618 AL353746.1-201ENST00000566293 6881 ntBASIC3.73□□□□□ -1.81
COPB1P53618 ASNSP3-201ENST00000451989 1306 ntBASIC3.72□□□□□ -1.81
COPB1P53618 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.72□□□□□ -1.81
COPB1P53618 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
COPB1P53618 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.72□□□□□ -1.81
COPB1P53618 NACAP2-201ENST00000318548 624 ntBASIC3.72□□□□□ -1.81
COPB1P53618 RNU6-845P-201ENST00000362578 103 ntBASIC3.72□□□□□ -1.81
COPB1P53618 RNA5SP119-201ENST00000362715 117 ntBASIC3.72□□□□□ -1.81
COPB1P53618 RNA5SP197-201ENST00000363357 119 ntBASIC3.72□□□□□ -1.81
COPB1P53618 RNU6-767P-201ENST00000384132 107 ntBASIC3.72□□□□□ -1.81
COPB1P53618 RNU6-332P-201ENST00000391193 108 ntBASIC3.72□□□□□ -1.81
COPB1P53618 RNU6-903P-201ENST00000391270 109 ntBASIC3.72□□□□□ -1.81
COPB1P53618 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
COPB1P53618 RAB9AP3-201ENST00000412737 573 ntBASIC3.72□□□□□ -1.81
COPB1P53618 PPP1R11P2-201ENST00000423543 382 ntBASIC3.72□□□□□ -1.81
COPB1P53618 HMGB3P11-201ENST00000440127 604 ntBASIC3.72□□□□□ -1.81
COPB1P53618 RAB9AP1-201ENST00000449393 573 ntBASIC3.72□□□□□ -1.81
COPB1P53618 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.72□□□□□ -1.81
COPB1P53618 AL118520.1-201ENST00000450770 291 ntBASIC3.72□□□□□ -1.81
COPB1P53618 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.72□□□□□ -1.81
COPB1P53618 RPS29P15-201ENST00000458329 171 ntBASIC3.72□□□□□ -1.81
COPB1P53618 AC008481.1-201ENST00000463278 396 ntBASIC3.72□□□□□ -1.81
COPB1P53618 AC010631.1-201ENST00000474150 156 ntBASIC3.72□□□□□ -1.81
COPB1P53618 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.72□□□□□ -1.81
COPB1P53618 AC004062.1-201ENST00000509926 645 ntBASIC3.72□□□□□ -1.81
COPB1P53618 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.72□□□□□ -1.81
COPB1P53618 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.72□□□□□ -1.81
COPB1P53618 AC026403.1-201ENST00000518938 295 ntBASIC3.72□□□□□ -1.81
COPB1P53618 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.72□□□□□ -1.81
COPB1P53618 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
COPB1P53618 AL121603.1-201ENST00000553815 142 ntBASIC3.72□□□□□ -1.81
COPB1P53618 MIR3186-201ENST00000577404 85 ntBASIC3.72□□□□□ -1.81
COPB1P53618 AC011712.1-201ENST00000588959 234 ntBASIC3.72□□□□□ -1.81
COPB1P53618 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.72□□□□□ -1.81
COPB1P53618 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.72□□□□□ -1.81
COPB1P53618 AL359697.1-201ENST00000624879 587 ntBASIC3.72□□□□□ -1.81
COPB1P53618 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
COPB1P53618 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.72□□□□□ -1.81
COPB1P53618 AC092326.2-201ENST00000624772 1561 ntBASIC3.72□□□□□ -1.81
COPB1P53618 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
COPB1P53618 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.71□□□□□ -1.81
COPB1P53618 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COPB1P53618 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
COPB1P53618 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
COPB1P53618 Y_RNA.11-201ENST00000362375 109 ntBASIC3.71□□□□□ -1.82
COPB1P53618 RNA5SP124-201ENST00000362739 110 ntBASIC3.71□□□□□ -1.82
COPB1P53618 RNA5SP72-201ENST00000364442 117 ntBASIC3.71□□□□□ -1.82
COPB1P53618 RNU6-61P-201ENST00000365528 109 ntBASIC3.71□□□□□ -1.82
COPB1P53618 RNU4-20P-201ENST00000365601 151 ntBASIC3.71□□□□□ -1.82
COPB1P53618 SNORA24.1-201ENST00000384401 135 ntBASIC3.71□□□□□ -1.82
COPB1P53618 MIR514A2-201ENST00000385131 88 ntBASIC3.71□□□□□ -1.82
COPB1P53618 MIR514A3-201ENST00000385132 88 ntBASIC3.71□□□□□ -1.82
COPB1P53618 RNU2-43P-201ENST00000410306 190 ntBASIC3.71□□□□□ -1.82
COPB1P53618 RNU6-193P-201ENST00000410977 107 ntBASIC3.71□□□□□ -1.82
COPB1P53618 RNU6-1148P-201ENST00000410992 104 ntBASIC3.71□□□□□ -1.82
COPB1P53618 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms