Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ZNF192P1-203ENST00000565888 810 ntBASIC0.55□□□□□ -2.32
BRCA2P51587 AC118469.1-201ENST00000442943 488 ntBASIC0.54□□□□□ -2.32
BRCA2P51587 SNORD56.5-201ENST00000364281 72 ntBASIC0.54□□□□□ -2.32
BRCA2P51587 RNU6-39P-201ENST00000384344 107 ntBASIC0.54□□□□□ -2.32
BRCA2P51587 SNORA8.3-201ENST00000384679 139 ntBASIC0.54□□□□□ -2.32
BRCA2P51587 AL355497.1-201ENST00000406262 551 ntBASIC0.54□□□□□ -2.32
BRCA2P51587 MRPL42P6-201ENST00000486397 371 ntBASIC0.54□□□□□ -2.32
BRCA2P51587 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.54□□□□□ -2.32
BRCA2P51587 AP003485.1-201ENST00000625093 753 ntBASIC0.54□□□□□ -2.32
BRCA2P51587 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC0.54□□□□□ -2.32
BRCA2P51587 RPL31P52-201ENST00000407532 367 ntBASIC0.54□□□□□ -2.32
BRCA2P51587 HMGB3P17-201ENST00000504195 649 ntBASIC0.54□□□□□ -2.32
BRCA2P51587 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC0.54□□□□□ -2.32
BRCA2P51587 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC0.54□□□□□ -2.32
BRCA2P51587 MIR5194-201ENST00000582634 120 ntBASIC0.54□□□□□ -2.32
BRCA2P51587 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.54□□□□□ -2.32
BRCA2P51587 AC110491.1-201ENST00000562191 2010 ntBASIC0.53□□□□□ -2.32
BRCA2P51587 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.53□□□□□ -2.32
BRCA2P51587 CBX3P1-201ENST00000325243 554 ntBASIC0.53□□□□□ -2.32
BRCA2P51587 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
BRCA2P51587 AC118282.2-201ENST00000508739 374 ntBASIC0.53□□□□□ -2.32
BRCA2P51587 RNU6-347P-201ENST00000516658 105 ntBASIC0.53□□□□□ -2.32
BRCA2P51587 AC136932.1-201ENST00000574771 208 ntBASIC0.53□□□□□ -2.32
BRCA2P51587 C2orf27A-204ENST00000623058 969 ntBASIC0.53□□□□□ -2.32
BRCA2P51587 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC0.53□□□□□ -2.32
BRCA2P51587 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.53□□□□□ -2.32
BRCA2P51587 RPS25P9-201ENST00000435591 252 ntBASIC0.53□□□□□ -2.32
BRCA2P51587 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.53□□□□□ -2.32
BRCA2P51587 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC0.53□□□□□ -2.32
BRCA2P51587 AC240442.1-201ENST00000616055 283 ntBASIC0.53□□□□□ -2.32
BRCA2P51587 OR9R1P-201ENST00000412200 877 ntBASIC0.52□□□□□ -2.33
BRCA2P51587 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.52□□□□□ -2.33
BRCA2P51587 ARPC3P2-201ENST00000457786 533 ntBASIC0.52□□□□□ -2.33
BRCA2P51587 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC0.52□□□□□ -2.33
BRCA2P51587 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
BRCA2P51587 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
BRCA2P51587 AC087359.1-201ENST00000508335 1740 ntBASIC0.52□□□□□ -2.33
BRCA2P51587 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC0.52□□□□□ -2.33
BRCA2P51587 AL035666.1-201ENST00000446195 348 ntBASIC0.52□□□□□ -2.33
BRCA2P51587 ELOCP5-201ENST00000604924 333 ntBASIC0.52□□□□□ -2.33
BRCA2P51587 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
BRCA2P51587 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
BRCA2P51587 U8.14-201ENST00000390843 143 ntBASIC0.52□□□□□ -2.33
BRCA2P51587 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC0.52□□□□□ -2.33
BRCA2P51587 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC0.52□□□□□ -2.33
BRCA2P51587 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.52□□□□□ -2.33
BRCA2P51587 SFR1P1-201ENST00000403720 688 ntBASIC0.51□□□□□ -2.33
BRCA2P51587 SNRPEP7-201ENST00000438350 220 ntBASIC0.51□□□□□ -2.33
BRCA2P51587 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC0.51□□□□□ -2.33
BRCA2P51587 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.51□□□□□ -2.33
BRCA2P51587 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
BRCA2P51587 Y_RNA.644-201ENST00000459006 113 ntBASIC0.51□□□□□ -2.33
BRCA2P51587 RPL31P60-201ENST00000478450 367 ntBASIC0.51□□□□□ -2.33
BRCA2P51587 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.51□□□□□ -2.33
BRCA2P51587 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC0.51□□□□□ -2.33
BRCA2P51587 RPS15AP11-201ENST00000594193 385 ntBASIC0.51□□□□□ -2.33
BRCA2P51587 AC108676.2-201ENST00000605225 163 ntBASIC0.51□□□□□ -2.33
BRCA2P51587 AL136313.1-201ENST00000624804 202 ntBASIC0.51□□□□□ -2.33
BRCA2P51587 MIR5087-201ENST00000635826 76 ntBASIC0.51□□□□□ -2.33
BRCA2P51587 MTCO1P56-201ENST00000401674 224 ntBASIC0.51□□□□□ -2.33
BRCA2P51587 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC0.51□□□□□ -2.33
BRCA2P51587 RBM43P1-201ENST00000476891 1081 ntBASIC0.51□□□□□ -2.33
BRCA2P51587 MRPS17P9-201ENST00000511924 393 ntBASIC0.51□□□□□ -2.33
BRCA2P51587 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
BRCA2P51587 Y_RNA.25-201ENST00000362528 102 ntBASIC0.5□□□□□ -2.33
BRCA2P51587 MIR153-2-201ENST00000385225 87 ntBASIC0.5□□□□□ -2.33
BRCA2P51587 MIR524-201ENST00000385242 87 ntBASIC0.5□□□□□ -2.33
BRCA2P51587 MRPL35P1-201ENST00000404272 572 ntBASIC0.5□□□□□ -2.33
BRCA2P51587 AC244453.4-201ENST00000419150 388 ntBASIC0.5□□□□□ -2.33
BRCA2P51587 AC246680.2-201ENST00000422106 389 ntBASIC0.5□□□□□ -2.33
BRCA2P51587 AC084033.1-201ENST00000550830 633 ntBASIC0.5□□□□□ -2.33
BRCA2P51587 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.5□□□□□ -2.33
BRCA2P51587 AC006461.1-201ENST00000412637 326 ntBASIC0.5□□□□□ -2.33
BRCA2P51587 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.5□□□□□ -2.33
BRCA2P51587 RNA5SP67-201ENST00000516422 131 ntBASIC0.5□□□□□ -2.33
BRCA2P51587 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.5□□□□□ -2.33
BRCA2P51587 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.5□□□□□ -2.33
BRCA2P51587 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.5□□□□□ -2.33
BRCA2P51587 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.5□□□□□ -2.33
BRCA2P51587 AC013470.4-201ENST00000619978 986 ntBASIC0.5□□□□□ -2.33
BRCA2P51587 AC092451.1-201ENST00000480211 153 ntBASIC0.49□□□□□ -2.33
BRCA2P51587 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC0.49□□□□□ -2.33
BRCA2P51587 AC009090.3-201ENST00000616553 565 ntBASIC0.49□□□□□ -2.33
BRCA2P51587 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.49□□□□□ -2.33
BRCA2P51587 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
BRCA2P51587 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC0.49□□□□□ -2.33
BRCA2P51587 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
BRCA2P51587 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.49□□□□□ -2.33
BRCA2P51587 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.49□□□□□ -2.33
BRCA2P51587 AL358794.1-201ENST00000445689 381 ntBASIC0.49□□□□□ -2.33
BRCA2P51587 YWHAQP7-201ENST00000603536 658 ntBASIC0.49□□□□□ -2.33
BRCA2P51587 AC079597.1-201ENST00000624306 508 ntBASIC0.49□□□□□ -2.33
BRCA2P51587 AL356379.1-201ENST00000414105 126 ntBASIC0.48□□□□□ -2.33
BRCA2P51587 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.48□□□□□ -2.33
BRCA2P51587 SDAD1P3-201ENST00000427380 333 ntBASIC0.48□□□□□ -2.33
BRCA2P51587 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC0.48□□□□□ -2.33
BRCA2P51587 OR6C72P-201ENST00000451403 892 ntBASIC0.48□□□□□ -2.33
BRCA2P51587 SNORD124-201ENST00000459577 104 ntBASIC0.48□□□□□ -2.33
BRCA2P51587 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.48□□□□□ -2.33
BRCA2P51587 MIR4493-201ENST00000584016 73 ntBASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms