Protein–RNA interactions for Protein: P48058

GRIA4, Glutamate receptor 4, humanhuman

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA4P48058 RNU1-83P-201ENST00000363426 164 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 Y_RNA.533-201ENST00000384596 114 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 Y_RNA.562-201ENST00000384695 113 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 MIR129-1-201ENST00000384972 72 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 MIR628-201ENST00000385229 95 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 RNU2-38P-201ENST00000410856 79 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 SUMO1P3-201ENST00000439961 304 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 RPS26P2-201ENST00000440331 348 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.79□□□□□ -1.64
GRIA4P48058 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.79□□□□□ -1.64
GRIA4P48058 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIA4P48058 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIA4P48058 AC091868.1-201ENST00000508746 304 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.79□□□□□ -1.64
GRIA4P48058 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.79□□□□□ -1.64
GRIA4P48058 AC007375.1-201ENST00000554513 578 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 AC090517.1-201ENST00000569307 266 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 AC008962.1-201ENST00000605729 304 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 RNA5SP108-201ENST00000605921 117 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 AL365434.2-201ENST00000607979 234 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 MIR1244-1-201ENST00000612829 85 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 AC130454.1-201ENST00000622948 401 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 MIR1244-3-201ENST00000635744 85 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 MIR1244-2-201ENST00000636449 85 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 MIR1244-4-202ENST00000636813 85 ntBASIC4.79□□□□□ -1.64
GRIA4P48058 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
GRIA4P48058 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.79□□□□□ -1.64
GRIA4P48058 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.79□□□□□ -1.64
GRIA4P48058 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
GRIA4P48058 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
GRIA4P48058 A2MP1-204ENST00000566278 4130 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
GRIA4P48058 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIA4P48058 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.78□□□□□ -1.64
GRIA4P48058 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIA4P48058 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIA4P48058 DEFB108F-201ENST00000344638 222 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 Y_RNA.64-201ENST00000362845 102 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 SNORD113.2-201ENST00000364166 89 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 RNU6-1317P-201ENST00000364582 104 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 Y_RNA.478-201ENST00000384358 107 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 Y_RNA.518-201ENST00000384552 113 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
GRIA4P48058 SNORA69.1-201ENST00000390904 137 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.78□□□□□ -1.64
GRIA4P48058 AL158156.1-201ENST00000422509 473 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 RPL23AP1-201ENST00000428990 471 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 AL132765.1-201ENST00000434165 553 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.78□□□□□ -1.64
GRIA4P48058 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.78□□□□□ -1.64
GRIA4P48058 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.78□□□□□ -1.64
GRIA4P48058 FTH1P9-201ENST00000513251 355 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 RN7SKP40-201ENST00000517211 242 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.78□□□□□ -1.64
GRIA4P48058 MIR5701-3-201ENST00000578890 82 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 MIR5701-1-201ENST00000585138 82 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.78□□□□□ -1.64
GRIA4P48058 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.78□□□□□ -1.64
GRIA4P48058 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.78□□□□□ -1.64
GRIA4P48058 AL158827.2-201ENST00000602494 330 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 AL161798.1-201ENST00000604630 131 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 AC096772.1-201ENST00000609146 564 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 AC064801.1-201ENST00000612025 407 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 AC004852.3-201ENST00000614131 326 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 MIR5701-2-201ENST00000615634 82 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.78□□□□□ -1.64
GRIA4P48058 AL691447.3-201ENST00000635020 330 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.78□□□□□ -1.64
GRIA4P48058 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIA4P48058 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIA4P48058 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
GRIA4P48058 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
GRIA4P48058 AL049555.1-201ENST00000562834 1933 ntBASIC4.78□□□□□ -1.64
GRIA4P48058 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GRIA4P48058 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
GRIA4P48058 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.77□□□□□ -1.65
GRIA4P48058 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GRIA4P48058 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
GRIA4P48058 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GRIA4P48058 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
GRIA4P48058 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GRIA4P48058 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
GRIA4P48058 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
GRIA4P48058 Y_RNA.60-201ENST00000362831 98 ntBASIC4.77□□□□□ -1.65
GRIA4P48058 MIR514A1-201ENST00000385133 98 ntBASIC4.77□□□□□ -1.65
GRIA4P48058 AL590762.2-201ENST00000395798 571 ntBASIC4.77□□□□□ -1.65
GRIA4P48058 RNU6-1025P-201ENST00000410629 104 ntBASIC4.77□□□□□ -1.65
GRIA4P48058 EI24P1-201ENST00000416584 867 ntBASIC4.77□□□□□ -1.65
GRIA4P48058 AC092423.1-201ENST00000430165 186 ntBASIC4.77□□□□□ -1.65
GRIA4P48058 AC092573.2-201ENST00000434546 243 ntBASIC4.77□□□□□ -1.65
GRIA4P48058 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.77□□□□□ -1.65
GRIA4P48058 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.77□□□□□ -1.65
GRIA4P48058 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
GRIA4P48058 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.77□□□□□ -1.65
GRIA4P48058 NIP7P2-201ENST00000485801 544 ntBASIC4.77□□□□□ -1.65
GRIA4P48058 AL049874.1-201ENST00000489560 388 ntBASIC4.77□□□□□ -1.65
GRIA4P48058 MLLT10P2-201ENST00000506434 249 ntBASIC4.77□□□□□ -1.65
GRIA4P48058 RNA5SP464-201ENST00000516251 108 ntBASIC4.77□□□□□ -1.65
GRIA4P48058 RNU6-897P-201ENST00000517135 105 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms