Protein–RNA interactions for Protein: P46779

RPL28, 60S ribosomal protein L28, humanhuman

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28P46779 AL591719.1-201ENST00000444669 744 ntBASIC1.4□□□□□ -2.19
RPL28P46779 PSPHP1-201ENST00000450062 261 ntBASIC1.4□□□□□ -2.19
RPL28P46779 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.4□□□□□ -2.19
RPL28P46779 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.4□□□□□ -2.19
RPL28P46779 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.4□□□□□ -2.19
RPL28P46779 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.4□□□□□ -2.19
RPL28P46779 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL28P46779 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RPL28P46779 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.4□□□□□ -2.19
RPL28P46779 AC118273.2-201ENST00000532092 465 ntBASIC1.4□□□□□ -2.19
RPL28P46779 MTCO2P15-201ENST00000532655 656 ntBASIC1.4□□□□□ -2.19
RPL28P46779 OR6C7P-201ENST00000547875 934 ntBASIC1.4□□□□□ -2.19
RPL28P46779 AC087897.1-201ENST00000550134 156 ntBASIC1.4□□□□□ -2.19
RPL28P46779 SNRPGP1-201ENST00000553864 222 ntBASIC1.4□□□□□ -2.19
RPL28P46779 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL28P46779 AC009063.1-201ENST00000563342 702 ntBASIC1.4□□□□□ -2.19
RPL28P46779 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.4□□□□□ -2.19
RPL28P46779 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.4□□□□□ -2.19
RPL28P46779 MIR3912-201ENST00000577566 105 ntBASIC1.4□□□□□ -2.19
RPL28P46779 LRRC37A5P-203ENST00000580181 585 ntBASIC1.4□□□□□ -2.19
RPL28P46779 MIR4435-1-201ENST00000582552 80 ntBASIC1.4□□□□□ -2.19
RPL28P46779 MIR4765-201ENST00000585007 77 ntBASIC1.4□□□□□ -2.19
RPL28P46779 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC1.4□□□□□ -2.19
RPL28P46779 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.4□□□□□ -2.19
RPL28P46779 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.4□□□□□ -2.19
RPL28P46779 AC091152.3-201ENST00000604227 325 ntBASIC1.4□□□□□ -2.19
RPL28P46779 AL121652.1-201ENST00000608851 448 ntBASIC1.4□□□□□ -2.19
RPL28P46779 uc_338.14-201ENST00000613162 166 ntBASIC1.4□□□□□ -2.19
RPL28P46779 AC107075.1-201ENST00000613695 314 ntBASIC1.4□□□□□ -2.19
RPL28P46779 MIR6873-201ENST00000622788 63 ntBASIC1.4□□□□□ -2.19
RPL28P46779 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL28P46779 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.4□□□□□ -2.19
RPL28P46779 MTND5P29-201ENST00000458676 1807 ntBASIC1.4□□□□□ -2.19
RPL28P46779 AC011477.1-204ENST00000623416 1325 ntBASIC1.4□□□□□ -2.19
RPL28P46779 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RPL28P46779 AC009487.4-201ENST00000624969 3585 ntBASIC1.39□□□□□ -2.19
RPL28P46779 Y_RNA.245-201ENST00000364493 95 ntBASIC1.39□□□□□ -2.19
RPL28P46779 Y_RNA.510-201ENST00000384511 114 ntBASIC1.39□□□□□ -2.19
RPL28P46779 RNU6-114P-201ENST00000384704 105 ntBASIC1.39□□□□□ -2.19
RPL28P46779 MTCO1P56-201ENST00000401674 224 ntBASIC1.39□□□□□ -2.19
RPL28P46779 AL603865.2-201ENST00000401679 213 ntBASIC1.39□□□□□ -2.19
RPL28P46779 RN7SKP158-201ENST00000410453 326 ntBASIC1.39□□□□□ -2.19
RPL28P46779 AC010153.1-201ENST00000432862 727 ntBASIC1.39□□□□□ -2.19
RPL28P46779 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
RPL28P46779 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.39□□□□□ -2.19
RPL28P46779 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RPL28P46779 HMGN2P10-201ENST00000448085 265 ntBASIC1.39□□□□□ -2.19
RPL28P46779 RNA5SP233-201ENST00000459153 113 ntBASIC1.39□□□□□ -2.19
RPL28P46779 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL28P46779 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.39□□□□□ -2.19
RPL28P46779 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.39□□□□□ -2.19
RPL28P46779 AC026801.1-201ENST00000497178 464 ntBASIC1.39□□□□□ -2.19
RPL28P46779 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC1.39□□□□□ -2.19
RPL28P46779 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC1.39□□□□□ -2.19
RPL28P46779 RNU6-927P-201ENST00000516199 100 ntBASIC1.39□□□□□ -2.19
RPL28P46779 RNA5SP200-201ENST00000516360 103 ntBASIC1.39□□□□□ -2.19
RPL28P46779 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.39□□□□□ -2.19
RPL28P46779 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL28P46779 DEFB130C-202ENST00000530001 230 ntBASIC1.39□□□□□ -2.19
RPL28P46779 AC006199.1-201ENST00000548728 219 ntBASIC1.39□□□□□ -2.19
RPL28P46779 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL28P46779 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL28P46779 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL28P46779 AC021739.1-201ENST00000559631 174 ntBASIC1.39□□□□□ -2.19
RPL28P46779 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL28P46779 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.39□□□□□ -2.19
RPL28P46779 AP001269.3-201ENST00000588718 329 ntBASIC1.39□□□□□ -2.19
RPL28P46779 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL28P46779 BBIP1P1-201ENST00000602999 279 ntBASIC1.39□□□□□ -2.19
RPL28P46779 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.39□□□□□ -2.19
RPL28P46779 AC046143.2-201ENST00000609789 160 ntBASIC1.39□□□□□ -2.19
RPL28P46779 AL512506.1-201ENST00000613918 449 ntBASIC1.39□□□□□ -2.19
RPL28P46779 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.39□□□□□ -2.19
RPL28P46779 AC079416.3-201ENST00000624479 549 ntBASIC1.39□□□□□ -2.19
RPL28P46779 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.39□□□□□ -2.19
RPL28P46779 AL359854.1-201ENST00000614203 1594 ntBASIC1.38□□□□□ -2.19
RPL28P46779 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
RPL28P46779 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
RPL28P46779 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RPL28P46779 RNU6-223P-201ENST00000362830 107 ntBASIC1.38□□□□□ -2.19
RPL28P46779 RNU6-486P-201ENST00000363116 107 ntBASIC1.38□□□□□ -2.19
RPL28P46779 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
RPL28P46779 Y_RNA.408-201ENST00000383987 102 ntBASIC1.38□□□□□ -2.19
RPL28P46779 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.38□□□□□ -2.19
RPL28P46779 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.38□□□□□ -2.19
RPL28P46779 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.38□□□□□ -2.19
RPL28P46779 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.38□□□□□ -2.19
RPL28P46779 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.38□□□□□ -2.19
RPL28P46779 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.38□□□□□ -2.19
RPL28P46779 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.38□□□□□ -2.19
RPL28P46779 UBE2D3P1-201ENST00000436669 444 ntBASIC1.38□□□□□ -2.19
RPL28P46779 FABP5P14-201ENST00000437273 393 ntBASIC1.38□□□□□ -2.19
RPL28P46779 AC018634.1-201ENST00000437554 401 ntBASIC1.38□□□□□ -2.19
RPL28P46779 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.38□□□□□ -2.19
RPL28P46779 CECR9-201ENST00000453421 199 ntBASIC1.38□□□□□ -2.19
RPL28P46779 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC1.38□□□□□ -2.19
RPL28P46779 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.38□□□□□ -2.19
RPL28P46779 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC1.38□□□□□ -2.19
RPL28P46779 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.38□□□□□ -2.19
RPL28P46779 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms