Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AP000240.1-201ENST00000609910 452 ntBASIC2.39□□□□□ -2.03
SHMT2P34897 AL355472.4-201ENST00000610233 626 ntBASIC2.39□□□□□ -2.03
SHMT2P34897 SNHG22-203ENST00000617833 660 ntBASIC2.39□□□□□ -2.03
SHMT2P34897 AC091965.5-201ENST00000624785 342 ntBASIC2.39□□□□□ -2.03
SHMT2P34897 AC243829.7-201ENST00000633081 225 ntBASIC2.39□□□□□ -2.03
SHMT2P34897 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SHMT2P34897 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SHMT2P34897 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SHMT2P34897 RNA5SP393-201ENST00000363423 117 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 RNU6-660P-201ENST00000364566 109 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
SHMT2P34897 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.38□□□□□ -2.03
SHMT2P34897 RNU6-253P-201ENST00000384730 105 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AC119751.3-201ENST00000399720 670 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AL356057.2-201ENST00000403318 432 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AL162578.1-201ENST00000406202 378 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 CCNG1P1-201ENST00000406783 885 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 RPL21P24-201ENST00000413752 448 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 HIGD1AP15-201ENST00000416198 280 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AC098592.1-201ENST00000419352 333 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 USP9YP26-201ENST00000421008 661 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 MTCO2P17-201ENST00000424336 677 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.38□□□□□ -2.03
SHMT2P34897 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.38□□□□□ -2.03
SHMT2P34897 FCF1P1-201ENST00000432690 571 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 RPS12P2-201ENST00000439728 269 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.38□□□□□ -2.03
SHMT2P34897 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.38□□□□□ -2.03
SHMT2P34897 AC020550.1-201ENST00000447385 163 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.38□□□□□ -2.03
SHMT2P34897 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC2.38□□□□□ -2.03
SHMT2P34897 AC010631.1-201ENST00000474150 156 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.38□□□□□ -2.03
SHMT2P34897 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.38□□□□□ -2.03
SHMT2P34897 AL391261.3-201ENST00000557194 520 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.38□□□□□ -2.03
SHMT2P34897 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.38□□□□□ -2.03
SHMT2P34897 ISCA1P3-201ENST00000577104 373 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 MIR4513-201ENST00000581077 86 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AP001004.1-201ENST00000582468 324 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 MIR4307-201ENST00000582802 84 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AC022022.2-201ENST00000602989 360 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AC136601.2-201ENST00000604356 474 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AL161729.4-201ENST00000604650 476 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AC079395.3-201ENST00000615161 484 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AL161629.2-201ENST00000615347 275 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 AC025034.2-201ENST00000623264 286 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.38□□□□□ -2.03
SHMT2P34897 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.38□□□□□ -2.03
SHMT2P34897 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SHMT2P34897 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SHMT2P34897 MIR449A-201ENST00000362113 91 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 Y_RNA.97-201ENST00000363094 102 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 AL359634.1-202ENST00000404721 284 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 U3.37-201ENST00000408528 213 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SHMT2P34897 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.37□□□□□ -2.03
SHMT2P34897 VPS26BP1-201ENST00000417155 755 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 RPL7P37-201ENST00000425095 738 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SHMT2P34897 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.37□□□□□ -2.03
SHMT2P34897 ZNF863P-201ENST00000426746 417 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.37□□□□□ -2.03
SHMT2P34897 ARPC3P1-201ENST00000437218 533 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.37□□□□□ -2.03
SHMT2P34897 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.37□□□□□ -2.03
SHMT2P34897 ELOCP30-201ENST00000447108 299 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SHMT2P34897 RNU7-23P-201ENST00000459465 62 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 AP000852.1-201ENST00000472460 573 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.37□□□□□ -2.03
SHMT2P34897 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SHMT2P34897 AC138853.1-201ENST00000503549 823 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 RPL37P25-201ENST00000507308 276 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.37□□□□□ -2.03
SHMT2P34897 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.37□□□□□ -2.03
SHMT2P34897 RNA5SP24-201ENST00000516478 95 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 SNORA31.11-201ENST00000516528 139 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 RNA5SP291-201ENST00000517222 105 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 MTCO1P47-201ENST00000523889 1271 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.37□□□□□ -2.03
SHMT2P34897 AP003461.1-201ENST00000528866 78 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 OR5BN1P-201ENST00000532955 829 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.37□□□□□ -2.03
SHMT2P34897 MIR4293-201ENST00000584305 78 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 AL645944.1-201ENST00000603857 493 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.37□□□□□ -2.03
SHMT2P34897 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.37□□□□□ -2.03
SHMT2P34897 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.37□□□□□ -2.03
SHMT2P34897 AC068880.5-201ENST00000624331 290 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 IGHVIII-44-202ENST00000636235 289 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHMT2P34897 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SHMT2P34897 AC008669.1-201ENST00000565823 2178 ntBASIC2.37□□□□□ -2.03
SHMT2P34897 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.37□□□□□ -2.03
SHMT2P34897 AL359693.1-201ENST00000614959 2407 ntBASIC2.36□□□□□ -2.03
SHMT2P34897 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms