Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC012443.1-201ENST00000605605 231 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 AL161423.1-201ENST00000613700 262 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 AC025016.1-201ENST00000616746 682 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 AL162373.1-201ENST00000620433 407 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.56□□□□□ -2.16
COL1A1P02452 SNORA3A-201ENST00000364113 130 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 MIR7-1-201ENST00000384871 110 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC1.55□□□□□ -2.16
COL1A1P02452 AC098614.2-201ENST00000426040 255 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 MTND5P25-201ENST00000430499 799 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.55□□□□□ -2.16
COL1A1P02452 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.55□□□□□ -2.16
COL1A1P02452 RPL31P60-201ENST00000478450 367 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 AC023790.1-201ENST00000482174 347 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 MTCYBP35-201ENST00000503630 1137 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 RNA5SP436-201ENST00000516020 115 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC1.55□□□□□ -2.16
COL1A1P02452 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.55□□□□□ -2.16
COL1A1P02452 AL138976.2-201ENST00000563989 694 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC1.55□□□□□ -2.16
COL1A1P02452 AC103710.4-201ENST00000609301 899 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 AC083806.3-201ENST00000614016 455 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 AP003399.1-201ENST00000637534 361 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 AC017104.5-201ENST00000637647 639 ntBASIC1.55□□□□□ -2.16
COL1A1P02452 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
COL1A1P02452 AL359851.1-201ENST00000569460 4997 ntBASIC1.54□□□□□ -2.16
COL1A1P02452 AC111188.2-201ENST00000529697 1387 ntBASIC1.54□□□□□ -2.16
COL1A1P02452 RNU6-1080P-201ENST00000383982 107 ntBASIC1.54□□□□□ -2.16
COL1A1P02452 RNU6-152P-201ENST00000384037 107 ntBASIC1.54□□□□□ -2.16
COL1A1P02452 AC068135.1-201ENST00000446164 246 ntBASIC1.54□□□□□ -2.16
COL1A1P02452 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC1.54□□□□□ -2.16
COL1A1P02452 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.54□□□□□ -2.16
COL1A1P02452 ATG12P2-201ENST00000456830 416 ntBASIC1.54□□□□□ -2.16
COL1A1P02452 AC104164.3-201ENST00000467363 1258 ntBASIC1.54□□□□□ -2.16
COL1A1P02452 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.54□□□□□ -2.16
COL1A1P02452 OR8K4P-201ENST00000534608 872 ntBASIC1.54□□□□□ -2.16
COL1A1P02452 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC1.54□□□□□ -2.16
COL1A1P02452 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.54□□□□□ -2.16
COL1A1P02452 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.54□□□□□ -2.16
COL1A1P02452 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.54□□□□□ -2.16
COL1A1P02452 AC011374.2-201ENST00000607135 526 ntBASIC1.54□□□□□ -2.16
COL1A1P02452 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.54□□□□□ -2.16
COL1A1P02452 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC1.54□□□□□ -2.16
COL1A1P02452 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.54□□□□□ -2.16
COL1A1P02452 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.54□□□□□ -2.16
COL1A1P02452 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
COL1A1P02452 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 MIR17-201ENST00000385012 84 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 RNU6-882P-201ENST00000391025 103 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 AP002784.2-201ENST00000397300 549 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 AC092745.2-202ENST00000411880 369 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 RPS20P15-201ENST00000412792 311 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 USP12PX-201ENST00000432383 1057 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 GPM6BP3-201ENST00000442797 145 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.53□□□□□ -2.16
COL1A1P02452 CABYRP1-201ENST00000465493 1045 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 RNU6-1095P-201ENST00000516148 108 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 SNORA31.13-201ENST00000516624 135 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.53□□□□□ -2.16
COL1A1P02452 SETP7-201ENST00000552169 453 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 AC068135.2-201ENST00000569293 1028 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 MTATP6P3-201ENST00000581686 676 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 AL355877.2-201ENST00000603670 358 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC1.53□□□□□ -2.16
COL1A1P02452 AC040168.1-201ENST00000623594 991 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC1.53□□□□□ -2.16
COL1A1P02452 RBBP8P1-201ENST00000449447 1844 ntBASIC1.53□□□□□ -2.16
COL1A1P02452 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
COL1A1P02452 MTND4P27-201ENST00000450813 1354 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 SNORA46.1-201ENST00000391069 153 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 AL356379.1-201ENST00000414105 126 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 VN1R108P-201ENST00000431580 830 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.52□□□□□ -2.17
COL1A1P02452 UBE2FP3-201ENST00000436366 524 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 AC104073.1-201ENST00000451988 151 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 COX6CP14-201ENST00000469580 174 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 RPL30P5-201ENST00000494923 336 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 FABP5P5-201ENST00000515537 406 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 RNU6-202P-201ENST00000515998 96 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 MIR514B-201ENST00000516774 80 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 AC104997.1-201ENST00000519761 717 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.52□□□□□ -2.17
COL1A1P02452 EIF1AXP2-201ENST00000555940 413 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 AL121821.2-201ENST00000556081 394 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 UBE2L4-201ENST00000587688 464 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 AC007229.1-201ENST00000590455 412 ntBASIC1.52□□□□□ -2.17
COL1A1P02452 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC1.52□□□□□ -2.17
COL1A1P02452 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC1.52□□□□□ -2.17
COL1A1P02452 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.52□□□□□ -2.17
COL1A1P02452 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.52□□□□□ -2.17
COL1A1P02452 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.52□□□□□ -2.17
COL1A1P02452 SNORD114-27-201ENST00000363766 70 ntBASIC1.51□□□□□ -2.17
COL1A1P02452 RNU6-1151P-201ENST00000384684 107 ntBASIC1.51□□□□□ -2.17
COL1A1P02452 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.51□□□□□ -2.17
COL1A1P02452 VPS26AP1-201ENST00000483197 979 ntBASIC1.51□□□□□ -2.17
COL1A1P02452 AC093801.2-201ENST00000503966 1050 ntBASIC1.51□□□□□ -2.17
COL1A1P02452 CA1-215ENST00000522389 551 ntTSL 3 BASIC1.51□□□□□ -2.17
COL1A1P02452 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.51□□□□□ -2.17
COL1A1P02452 AC084033.1-201ENST00000550830 633 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms